PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00003g04130.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

NF-YA

Protein Properties

Length: 194aa MW: 22185.6 Da PI: 6.939

Description

NF-YA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00003g04130.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CBFB_NFYA	47.3	6.8e-15	69	104	1	37
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkp 37 +ep+YVNaKQy++Il+RRq Rak+ e+k+ ksrk+ Peaxi162Scf00003g04130.1 69 EEPMYVNAKQYHGILRRRQLRAKAVLEQKV-VKSRKK 104 69***************************9.777776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00521	5.4E-8	67	128	IPR001289	Nuclear transcription factor Y subunit A
PROSITE profile	PS51152	16.041	68	104	IPR001289	Nuclear transcription factor Y subunit A
Pfam	PF02045	1.1E-10	70	104	IPR001289	Nuclear transcription factor Y subunit A

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence Send to blast
MGPDSDYKRQ DKHGVAFMPS MINENVTTAD QFELMGQPSI AFNSYPYSES QNVERLNHSR 60 MILPLEVTEE PMYVNAKQYH GILRRRQLRA KAVLEQKVVK SRKKQPTTNG NNNAATSSKS 120 KESCASEIFM DFDSCQSHQF NSTADHVQGF QFEGIHNNNN TENLQLSCCH YQWNLNDNNV 180 HCMQSEAASN LKQF

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016441402.1	2e-61	PREDICTED: nuclear transcription factor Y subunit A-7-like
TrEMBL	A0A1S3XP29	3e-60	A0A1S3XP29_TOBAC; nuclear transcription factor Y subunit A-7-like
STRING	XP_009767409.1	9e-61	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA13392	15	16

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20910.1	2e-16	nuclear factor Y, subunit A9