PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00005g00388.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family S1Fa-like
Protein Properties Length: 211aa    MW: 23691.3 Da    PI: 9.8541
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00005g00388.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA120.55.9e-38145211470
                      S1FA   4 akveakGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPGe 70 
                               + ve+kG+nP l vl+vvggl+l fl++ny lyvyaq++lPP+kkkPvskkk+kre+lkqGv++PGe
  Peaxi162Scf00005g00388.1 145 KDVEVKGFNPALTVLMVVGGLVLAFLIANYGLYVYAQRTLPPKKKKPVSKKKMKRERLKQGVSAPGE 211
                               679***************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0190138.0E-5146211No hitNo description
PfamPF046891.0E-35147211IPR006779DNA binding protein S1FA
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MAMYTTRGSS WKDKGVGGYN KKKPPMECDY CGLKNHTRDG CWKINGYLNE KKGRRKSNAN  60
NIVDNTDNKS VDGYVKQAPG YFFTQSQYEQ ILQLLSKEEA PLQDNTMANM AVLLLVNIAQ  120
FSESMDFEAD FDPPPSFDNV KNMAKDVEVK GFNPALTVLM VVGGLVLAFL IANYGLYVYA  180
QRTLPPKKKK PVSKKKMKRE RLKQGVSAPG E
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31742249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37120.12e-06S1FA-like DNA-binding protein