PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00007g00141.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

GeBP

Protein Properties

Length: 408aa MW: 45227.4 Da PI: 6.0839

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00007g00141.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	112.6	2.6e-35	158	250	3	98
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqk 87 ++rlw++eD+i++L+G+ +fka++g +p +d++af++fvk++++++vsksql++K+rrLKkKf ++vk+ g +p+f k+hd Peaxi162Scf00007g00141.1 158 PNRLWNDEDQIAVLKGMAEFKAQKGIEPNSDMSAFHDFVKGKLQVEVSKSQLSDKVRRLKKKFFTHVKN---GGDPVFPKPHDYL 239 78****************************************************************9...********* PP DUF573 88 ifelskkiWgs 98 +fe+skkiWgs Peaxi162Scf00007g00141.1 240 VFEYSKKIWGS 250 *******95 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	2.6E-30	159	249	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence Send to blast
MAPKSKSRLV EEPPSASSSE EQEQVEESQE EQESEEEQQQ EQEQEQSDEE QESEEEEPKT 60 APVVKKPTIS KTPQKTQSSS SESGSGSDSE SDSGQSQQPS PSASDFTVKP SAPVPTKVPA 120 KRPQETQEKA QKDSRRLKKP KIAEEQEDKK ALSSVSTPNR LWNDEDQIAV LKGMAEFKAQ 180 KGIEPNSDMS AFHDFVKGKL QVEVSKSQLS DKVRRLKKKF FTHVKNGGDP VFPKPHDYLV 240 FEYSKKIWGS GGKADSNAGT SNGVSESVVN ANGKAKKTAP VEVKKGSESK KSAKVSTKPK 300 DVEKPKEDEK VKDVAVKEVV KEDVVKGGDR QDFQSKYPHL AASFDLPAVY PSASDMLKKN 360 MSLIDGDKAK VLEEKWKKLH DAEADLMLKR LDLVREHYKL VVDAMRGN

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence Send to blast

MAPKSKSRLV EEPPSASSSE EQEQVEESQE EQESEEEQQQ EQEQEQSDEE QESEEEEPKT  60
APVVKKPTIS KTPQKTQSSS SESGSGSDSE SDSGQSQQPS PSASDFTVKP SAPVPTKVPA  120
KRPQETQEKA QKDSRRLKKP KIAEEQEDKK ALSSVSTPNR LWNDEDQIAV LKGMAEFKAQ  180
KGIEPNSDMS AFHDFVKGKL QVEVSKSQLS DKVRRLKKKF FTHVKNGGDP VFPKPHDYLV  240
FEYSKKIWGS GGKADSNAGT SNGVSESVVN ANGKAKKTAP VEVKKGSESK KSAKVSTKPK  300
DVEKPKEDEK VKDVAVKEVV KEDVVKGGDR QDFQSKYPHL AASFDLPAVY PSASDMLKKN  360
MSLIDGDKAK VLEEKWKKLH DAEADLMLKR LDLVREHYKL VVDAMRGN

Functional Description ? help Back to Top
Source	Description
UniProt	May act as a transcriptional regulator. Binds specifically to the B-box motif, a promoter element that is required for the tuber-specific and sucrose inducible expression of the patatin gene. {ECO:0000269\|PubMed:12028578}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019249450.1	1e-141	PREDICTED: STOREKEEPER protein-like
Swissprot	Q94IK2	1e-127	STK_SOLTU; STOREKEEPER protein
TrEMBL	A0A1J6IR12	1e-140	A0A1J6IR12_NICAT; Uncharacterized protein
STRING	XP_009777843.1	1e-139	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2369	20	41

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	2e-25	DNA-binding storekeeper protein-related transcriptional regulator