PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00015g00941.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

NAC

Protein Properties

Length: 327aa MW: 36884.5 Da PI: 6.5176

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00015g00941.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.1	1.1e-55	5	131	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85 lppGfrFhPtdeel+ +yL++kv++ ++++ +++++vd++k+ePwdLp+k++ ++kewyfF rd+ky+tg r+nrat++gyWk+ Peaxi162Scf00015g00941.1 5 LPPGFRFHPTDEELIIYYLTNKVSDVSFSA-RAFADVDLNKCEPWDLPAKASMGKKEWYFFNLRDRKYPTGLRTNRATEAGYWKT 88 79************************99.88***********9999999************************** PP NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 tgkdke+++ +g lvg+kktLvfy+grapkg+kt+Wvmheyrle Peaxi162Scf00015g00941.1 89 TGKDKEIFH-GGVLVGMKKTLVFYRGRAPKGQKTNWVMHEYRLE 131 *****.******************************85 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	8.37E-64	3	151	IPR003441	NAC domain
PROSITE profile	PS51005	59.369	5	151	IPR003441	NAC domain
Pfam	PF02365	2.3E-28	6	130	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence Send to blast
MEETLPPGFR FHPTDEELII YYLTNKVSDV SFSARAFADV DLNKCEPWDL PAKASMGKKE 60 WYFFNLRDRK YPTGLRTNRA TEAGYWKTTG KDKEIFHGGV LVGMKKTLVF YRGRAPKGQK 120 TNWVMHEYRL ETEHGLKPSK EEWVVCRVFQ KSSTVKKQQP TSSSPQYSLE SPNCDTNYTI 180 ANEIGDIHEL LNFNGIATPS NGINNNISLQ NYVNENMNMN LNLAAATNIV PLLPNLSSSL 240 LSSNLSSVNS LLLRALQSRV YNQPREAATV SDYYSLITPS LQGISHFGND FTNSNFAEGV 300 ASSSMVLDSV QQQQVQEEPC KLDIDIW

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3swm_A	4e-57	4	157	19	174	NAC domain-containing protein 19
3swm_B	4e-57	4	157	19	174	NAC domain-containing protein 19
3swm_C	4e-57	4	157	19	174	NAC domain-containing protein 19
3swm_D	4e-57	4	157	19	174	NAC domain-containing protein 19
3swp_A	4e-57	4	157	19	174	NAC domain-containing protein 19
3swp_B	4e-57	4	157	19	174	NAC domain-containing protein 19
3swp_C	4e-57	4	157	19	174	NAC domain-containing protein 19
3swp_D	4e-57	4	157	19	174	NAC domain-containing protein 19
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AF510212	0.0	AF510212.1 Petunia x hybrida nam-like protein 15 (NH15) mRNA, partial cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009763274.1	1e-151	PREDICTED: NAC domain-containing protein 77-like isoform X1
Refseq	XP_016442160.1	1e-151	PREDICTED: NAC domain-containing protein 79-like isoform X1
TrEMBL	Q8LKN9	0.0	Q8LKN9_PETHY; Nam-like protein 15 (Fragment)
STRING	XP_009763274.1	1e-150	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA152	24	279

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18400.1	1e-101	NAC domain containing protein 58