PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00016g00168.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family NAC
Protein Properties Length: 259aa    MW: 30314.2 Da    PI: 7.7731
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00016g00168.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM70.73.8e-2231226128
                       NAM   6 rFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgk 88 
                               +F+P d+e + +yL + v gk++ + ++i+++d+y   +P ++    +++++  yfF++ ++k+ +gk+ nr ++  g+Wk++ k
  Peaxi162Scf00016g00168.1   3 KFRPYDDEELIHYLMNFVCGKPFVECHHIRQIDVYGDkKPCEIF---DNSSDVNYFFTQLRRKTVRGKKFNRqIAGGGTWKSQEK 84 
                               89**8766555***********888899******97549****5...4455678******************777899******* PP

                       NAM  89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                               +++v++++++++g  kt+ f ++++   ++ +W m+ey l
  Peaxi162Scf00016g00168.1  85 QRPVFANNKSVIGFMKTFRFEEENSD--KSIKWYMKEYCL 122
                               ********************955544..589*******87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100525.071149IPR003441NAC domain
SuperFamilySSF1019415.89E-223149IPR003441NAC domain
PfamPF023653.1E-123122IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MTKFRPYDDE ELIHYLMNFV CGKPFVECHH IRQIDVYGDK KPCEIFDNSS DVNYFFTQLR  60
RKTVRGKKFN RQIAGGGTWK SQEKQRPVFA NNKSVIGFMK TFRFEEENSD KSIKWYMKEY  120
CLSDIVLKEL REGRQIRHED YVLCRIKRKV KFCSTTNNFQ CGEKNVVANR NHNLGSSSSQ  180
NQEKVSVSWT PSISKSSEDE FQALQENTID VASYHKELDA YAKAILESNP PLVPHIPQEL  240
DDCPLFSEDF YIGHHALWS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGXP_009607153.12e-51(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1477126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.14e-14NAC domain containing protein 2