PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00016g00423.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family TALE
Protein Properties Length: 660aa    MW: 73292.1 Da    PI: 5.4955
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00016g00423.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.42.8e-094314681954
                               HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
                  Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                               Fe   ++yp+ +++  LA+++gLt +qV++WF N R +
  Peaxi162Scf00016g00423.1 431 FEHflHPYPKDSDKIMLARQTGLTRSQVSNWFINARVR 468
                               664459******************************88 PP
2BELL125.71.8e-40293364172
                      BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                               e+qe q+k +kLls+l+e+d+rY+qy++q+q+v+ssF++vag g+akpYt+lAl++iSrhFrcL+dai++qi
  Peaxi162Scf00016g00423.1 293 EKQEAQNKLTKLLSMLDEIDRRYRQYYHQMQIVVSSFDVVAGDGAAKPYTALALQTISRHFRCLRDAICDQI 364
                               689********************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005742.5E-60215362IPR006563POX domain
PfamPF075261.7E-50221360IPR006563POX domain
PROSITE profilePS5007112.115409472IPR001356Homeobox domain
SMARTSM003891.6E-9412476IPR001356Homeobox domain
CDDcd000861.68E-12412473No hitNo description
SuperFamilySSF466892.65E-17413479IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.1E-28415478IPR009057Homeodomain-like
PfamPF059204.4E-18429468IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 660 aa     Download sequence    Send to blast
MATYFPSPNN QRDAGTFQYL RPLPGSYSEA PNAQENMMMF MNYSSSGSYS DMLTGTSQQQ  60
NSCIDIPPVG ASDSNTSQQE ILSNLGGSRI EMHDFSAWKD SRNEMLAMHS MGAPDSVIQV  120
AQNVQGQGLS LSLGSNIPSG IGFSHVQCQN PNQGFMSFLT PTSAIPGESS GGNVSYGGDD  180
NSHPKQQRNA DYMPPGYPGS NSDATKGHIS PYNTSSITRA IPNSKYLKAA QYLLDEVVNV  240
RKAIKDHNSK KELIKDTKEF DGDSKNKSSD PPAEGSSNPQ ESNSNHSELS TTEKQEAQNK  300
LTKLLSMLDE IDRRYRQYYH QMQIVVSSFD VVAGDGAAKP YTALALQTIS RHFRCLRDAI  360
CDQIRASRKS VGEQDASENS RVVGISRLRY VDQHIRQQRA LQQLGMVQQH AWRPQRGLPE  420
TSVSILRAWL FEHFLHPYPK DSDKIMLARQ TGLTRSQVSN WFINARVRLW KPMVEEMYKE  480
EAGDVEMDSN SSSEVAPRLA TKDSKVEERE ELQQNATSEF GGQTLESKSN HVADIEMEGA  540
NKAETQNQSG MENQRDEPRH AMDNCTMFDT FVQGNDRFSE FGRFGSGNVL QNGVSLTLGL  600
QQGEGSNLPM SIESHVSYVP VRADDMYSTT PTTMVPETAE FNCLDSGNRQ HPFWLLPSAT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A3e-16418476563Homeobox protein Meis2
3k2a_B3e-16418476563Homeobox protein Meis2
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU6863790.0EU686379.1 Solanum etuberosum BEL30 protein mRNA, complete cds.
GenBankEU6863830.0EU686383.1 Solanum palustre BEL30 protein mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016539788.10.0PREDICTED: BEL1-like homeodomain protein 6
TrEMBLA0A1U8DXN40.0A0A1U8DXN4_CAPAN; BEL1-like homeodomain protein 7
TrEMBLA0A2G2XWS00.0A0A2G2XWS0_CAPAN; BEL1-like homeodomain protein 6
STRINGXP_009757871.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA102052226
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34610.21e-130BEL1-like homeodomain 6