PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00017g02837.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 190aa    MW: 21734.1 Da    PI: 10.1046
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00017g02837.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.93.6e-082171655
                              HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH  6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                              + +E++RR +++   ++L +l+P+  +k++++ l+  + + +A+ YI +L+
  Peaxi162Scf00017g02837.1 21 KTVEKNRRIQMKYLCSKLFSLIPPhHFKPSKEMLTQQDQVDQAITYIEQLK 71
                              679*********************887777777****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508888.9121570IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-71674IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.2E-82185IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-42270IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0050832Biological Processdefense response to fungus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
MERSSKCNNI SNTTSEKPDR KTVEKNRRIQ MKYLCSKLFS LIPPHHFKPS KEMLTQQDQV  60
DQAITYIEQL KERVEVLKRR KEVSQGTGHK TSSSKGVMTS TKSLKTPVVE VRELGSTIEV  120
ILISGLEKNF TMQEIINILE EEGAQVVTAD FATLHDKVFY TVHAQVRISR LGVDASRVYW  180
RVQKLVNLIS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009618665.13e-95PREDICTED: transcription factor ORG3-like
RefseqXP_016456924.13e-95PREDICTED: transcription factor ORG3-like
TrEMBLA0A1S3YXK08e-94A0A1S3YXK0_TOBAC; transcription factor ORG3-like
STRINGXP_009618665.11e-94(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA60831423
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.19e-30bHLH family protein