PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00032g00309.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 311aa    MW: 34618.6 Da    PI: 9.6301
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00032g00309.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY45.91.2e-142592972259
                               EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY  22 rsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                +YY+C+s  gCp++k+ver+ ++p+v+++tYegeH h+
  Peaxi162Scf00032g00309.1 259 MAYYKCSSLkGCPARKHVERALDEPTVLIVTYEGEHIHS 297
                               58*****998***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105337.0E-17214260IPR018872Zn-cluster domain
SMARTSM007741.4E-7251298IPR003657WRKY domain
PfamPF031068.9E-12258296IPR003657WRKY domain
SuperFamilySSF1182903.27E-11259297IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.8E-14259297IPR003657WRKY domain
PROSITE profilePS5081115.812260299IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MAVELMMNYR DTSNRNISNN STILMTNLEE KAAVLEEADS GLESVEKLIK LLSQSYSQQK  60
QGNFLTSYQE HQETSPMEIK FVADAAVNKF KNVISLLGRN KIGHARFRRA PIAPIDAKIY  120
CPTPIQQVPP VAYELYNHQY YQVPTNELVV KQEMITKNID FSCAKNISRS HSFSVSTITG  180
ETESYKQLSK SSSFQISNLS SAGKPPLSSS SSFKRRCSSS ENGISGKCSV SSGGRCHCSK  240
KRKLRLKRVV RVPAISMKMA YYKCSSLKGC PARKHVERAL DEPTVLIVTY EGEHIHSLSV  300
AETSSLILES S
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAJ5388761e-48AJ538876.1 Nicotiana tabacum cDNA-AFLP-fragment BT2-M23-021.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019241749.11e-142PREDICTED: probable WRKY transcription factor 15
TrEMBLA0A1J6KB261e-139A0A1J6KB26_NICAT; Putative wrky transcription factor 7
STRINGXP_009600092.11e-137(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12202479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23320.12e-38WRKY DNA-binding protein 15