PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00042g00077.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WOX
Protein Properties Length: 391aa    MW: 43224.9 Da    PI: 7.5616
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00042g00077.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox54.61.8e-1753113257
                               T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                  Homeobox   2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                               ++R+++ +eq+++Le+ F++   +p ++e++++ +kl    ++ +++V++WFqNr+ + k+
  Peaxi162Scf00042g00077.1  53 KPRWNPRPEQIRILEAIFNSgMVNPPRDEIRKIRAKLqeygQVGDANVFYWFQNRKSRSKH 113
                               89*****************99*************************************995 PP
2Wus_type_Homeobox111.74e-3652115265
         Wus_type_Homeobox   2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                               +++RW+P+peQi+iLe++++sG+++P+++ei++i+a+L+eyG+++d+NVfyWFQNrk+R+++kq
  Peaxi162Scf00042g00077.1  52 PKPRWNPRPEQIRILEAIFNSGMVNPPRDEIRKIRAKLQEYGQVGDANVFYWFQNRKSRSKHKQ 115
                               689***********************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.29E-1249117IPR009057Homeodomain-like
PROSITE profilePS5007110.38249114IPR001356Homeobox domain
SMARTSM003895.7E-951118IPR001356Homeobox domain
CDDcd000863.85E-852115No hitNo description
Gene3DG3DSA:1.10.10.601.1E-652119IPR009057Homeodomain-like
PfamPF000464.5E-1553113IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    Send to blast
MASSNRHWPS MFKSKPCNSH HHHHQWQHDI NSSLIQRAPC NPGGCEERSP EPKPRWNPRP  60
EQIRILEAIF NSGMVNPPRD EIRKIRAKLQ EYGQVGDANV FYWFQNRKSR SKHKQRQSTK  120
VNQQTPHNNI TITAPSNSSS SSSDKSSQNS TGHHHKTSSS LTFSIGSTNV MDLLNSPTAS  180
VNQQQQTYNF QNEFFLNEPF FFAIEPAPSP TAQSASVTQG LCFPEYSTSF SSSHHVTNPS  240
AAGLFMSDIM GISQTPSKKT EMNLQSELMS YTSTVTSAPT TTTHSVLPLT TTTTTPTTIP  300
ASSHIQGVVE PTGAAPTRST VFINDVAFEV GVGPFNVKEV FGEDAVLIHS SGEPLVTNEW  360
GLTIQPLQHG AFYYLLRTST ATHDQNTIDL I
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1872820.0EF187282.1 Petunia x hybrida SISTER OF EVERGREEN mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009793301.10.0PREDICTED: WUSCHEL-related homeobox 9-like isoform X1
RefseqXP_009793302.10.0PREDICTED: WUSCHEL-related homeobox 9-like isoform X2
RefseqXP_016489291.10.0PREDICTED: WUSCHEL-related homeobox 9-like
TrEMBLA9XDF80.0A9XDF8_PETHY; SISTER OF EVERGREEN
STRINGXP_009793301.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA59422335
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33880.11e-53homeobox-3