PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00044g00179.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family FAR1
Protein Properties Length: 339aa    MW: 39358.8 Da    PI: 9.3127
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00044g00179.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR150.47.6e-1695180290
                      FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHn 86 
                                Yn Y    GF vrk++++++ rn+e t+  f C++eg++   ++  ++++r+r e r+gC a+++ k + +g we  ++  eHn
  Peaxi162Scf00044g00179.1  95 AYNLYVIAKGFGVRKRAKTYN-RNQELTRCLFLCTCEGQSPLYSNY-KERKRQRLEYRCGCLARIRFKIS-NGMWEAFEFCDEHN 176
                               59**************99998.7888**************999998.99999****************99.************** PP

                      FAR1  87 Hela 90 
                               H++ 
  Peaxi162Scf00044g00179.1 177 HPMI 180
                               *985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.7E-1395180IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MKPLCWVASL VHGKDFWLRQ EDTIRQFRQE MLQKPLPTIC SNYYKAKHQN QRQNIVDHNN  60
EQRSPTLVKN VSKINRVFTL KIGMKFSSED ESYEAYNLYV IAKGFGVRKR AKTYNRNQEL  120
TRCLFLCTCE GQSPLYSNYK ERKRQRLEYR CGCLARIRFK ISNGMWEAFE FCDEHNHPMI  180
EENLRHFIQW TKNANQGNRF EECNYKKKAP TSSMVIHLNG LMKKSFVVMT LAASDVKSEE  240
IARKNLYQAK VEITKLEGEL YAEASHKSFP KSSTSNGPSS GVNDQVLDPV KKKLHENPNT  300
SFMELMTQAS PNQFRGCIGD ETANICERNA DFGGQENVF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1726931
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.11e-11FAR1-related sequence 10