PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00045g00146.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

NAC

Protein Properties

Length: 312aa MW: 35239.9 Da PI: 9.1346

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00045g00146.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	177.1	4.8e-55	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85 lppGfrFhPtdeel+++yL +k+++ +++ ++i++vd++k+ePwdLp k+k + kewyfFs rd+ky+tg r+nrat++gyWk+ Peaxi162Scf00045g00146.1 9 LPPGFRFHPTDEELITYYLVNKISDASFTG-RAIADVDLNKCEPWDLPGKAKMGGKEWYFFSLRDRKYPTGVRTNRATNTGYWKT 92 79***********************999.89***********999999*************************** PP NAM 86 tgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 tgkdke++++ ++elvg+kktLvfykgrap+gek++Wvmheyr+ Peaxi162Scf00045g00146.1 93 TGKDKEIFNSkTSELVGMKKTLVFYKGRAPRGEKSNWVMHEYRI 136 ****9867888*************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	4.58E-64	6	158	IPR003441	NAC domain
PROSITE profile	PS51005	61.205	9	158	IPR003441	NAC domain
Pfam	PF02365	8.6E-29	10	136	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence Send to blast
MEESKEESLP PGFRFHPTDE ELITYYLVNK ISDASFTGRA IADVDLNKCE PWDLPGKAKM 60 GGKEWYFFSL RDRKYPTGVR TNRATNTGYW KTTGKDKEIF NSKTSELVGM KKTLVFYKGR 120 APRGEKSNWV MHEYRIRSKS TYRTTKQDEW VVCRIFQKSG GMKKYPSTNN HSRAVVNPYS 180 LEMNQNAMSS QMMQPDHHAF QIAMGRSYIN HASNMNFPIQ PQMTYNMGGS SSGGGDNFFS 240 ISGLNLNLGG GVATSQPVLR PMPLPPPPPQ VMNPQDVTSM MVNCPITSEA GYGVEMNNAN 300 YCADLDNYWA TY

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	8e-56	8	164	16	171	NO APICAL MERISTEM PROTEIN
1ut4_B	8e-56	8	164	16	171	NO APICAL MERISTEM PROTEIN
1ut7_A	8e-56	8	164	16	171	NO APICAL MERISTEM PROTEIN
1ut7_B	8e-56	8	164	16	171	NO APICAL MERISTEM PROTEIN
3swm_A	9e-56	8	164	19	174	NAC domain-containing protein 19
3swm_B	9e-56	8	164	19	174	NAC domain-containing protein 19
3swm_C	9e-56	8	164	19	174	NAC domain-containing protein 19
3swm_D	9e-56	8	164	19	174	NAC domain-containing protein 19
3swp_A	9e-56	8	164	19	174	NAC domain-containing protein 19
3swp_B	9e-56	8	164	19	174	NAC domain-containing protein 19
3swp_C	9e-56	8	164	19	174	NAC domain-containing protein 19
3swp_D	9e-56	8	164	19	174	NAC domain-containing protein 19
4dul_A	8e-56	8	164	16	171	NAC domain-containing protein 19
4dul_B	8e-56	8	164	16	171	NAC domain-containing protein 19
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AF510216	0.0	AF510216.1 Petunia x hybrida nam-like protein 19 (NH19) mRNA, partial cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009760064.1	0.0	PREDICTED: NAC domain-containing protein 77-like
TrEMBL	A0A1U7VCP2	1e-180	A0A1U7VCP2_NICSY; NAC domain-containing protein 77-like
STRING	XP_009760064.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA152	24	279

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24430.2	1e-104	NAC domain containing protein 38