PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00045g01642.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family B3
Protein Properties Length: 1133aa    MW: 129530 Da    PI: 9.3672
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00045g01642.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.69.5e-18793697
                              ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                        B3  6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92
                              +p++++++   v+p +fa+++++++++  t++++d + rsW++ l    +++ +++++GW+eF+ +n++kegD ++F+ ++ +++++
  Peaxi162Scf00045g01642.1  7 IPKSSHAQIPQVIPTQFARRNKLNNRK-CTISMRD-EQRSWTFSL--YTSGRNTYFGRGWREFCIENRVKEGDRLMFEIVS-NGETP 88
                              566666666679*********999765.5*****9.679******..88888899***********************887.66668 PP

                              EEEEE CS
                        B3 93 vvkvf 97
                              v++++
  Peaxi162Scf00045g01642.1 89 VFRFY 93
                              88776 PP
2B346.47e-15142228494
                               E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
                        B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                                ++++++  ++ l+lp  fa+++g+ +++  +++l +e+ rsW+v l  r  s ++ + +GWk+F +an+++ gD++ F+l++++
  Peaxi162Scf00045g01642.1 142 STIQPYSIDHHFLYLPSVFAKTNGLFNRR-CEMILINEKWRSWSVHL--RPMSHHTGIYRGWKQFKEANDVQLGDTFKFELINNE 223
                               46799999***************887655.59***************..****99**************************9976 PP

                               EE..EE CS
                        B3  89 efelvv 94 
                               e  +vv
  Peaxi162Scf00045g01642.1 224 EL-PVV 228
                               66.555 PP
3B343.27.2e-142413052799
                               ---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                        B3  27 ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                               g+ ++ +k+ ++  + g++W vk+  ++++    l++GW +Fv++++L+ gD++vF+++g++ef  +v++f++
  Peaxi162Scf00045g01642.1 241 GIREALDKEHVVLRRAGKKWLVKF--NGRQ----LEEGWGKFVEEHDLQLGDVLVFRHEGDMEF--KVTIFDS 305
                               55667788899999**********..8887....************************999999..9999986 PP
4B345.51.4e-14367449591
                               -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
                        B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                               +++++ l++g ++lpk+fa ++g+ ++ +  l+++de+ rsW+++l y+ + + ++ ++ W +F+ an+L++gD +  +++++ +
  Peaxi162Scf00045g01642.1 367 TVKPYCLSNGYFRLPKDFAMANGLTNK-KCGLIIRDERQRSWNFRL-YTSY-SNVYVGGKWGKFCVANDLQVGDHIRCEVVSN-G 447
                               567999****************77644.347999************.5555.5667799***************998887763.4 PP

                               E. CS
                        B3  90 fe 91 
                               ++
  Peaxi162Scf00045g01642.1 448 EK 449
                               44 PP
5B345.91e-14643725699
                               ..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
                        B3   6 tpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                               ++++  ++  l +p  f+ ++ +g +   ++ ++  + g++W vkl  + ++    l++GW +F+++++L+ gD++vF+++g++e
  Peaxi162Scf00045g01642.1 643 IKPYIITNPVLKIPVGFL-NYlKGHE---QEHVVLRRAGKKWLVKL--NDHR----LEEGWGKFAEEHDLQLGDILVFRYEGDME 717
                               567777888899******.5545553...35677888*********..6666....**************************999 PP

                               E..EEEEE-S CS
                        B3  90 felvvkvfrk 99 
                               f   v++f++
  Peaxi162Scf00045g01642.1 718 F--DVSIFDS 725
                               9..9999986 PP
6B339.31.2e-12787857477
                               E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT CS
                        B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkeg 77 
                                ++++++ +++ l+lp  fa+++g+k  +  +++l+de  rsW+v+l   k+++ + +t GW +F  an+L+ +
  Peaxi162Scf00045g01642.1 787 STIKPYSISKAVLYLPMGFAKSNGLKIGK-CKMILKDEAHRSWSVQL--GKYGNNFGITCGWTQFRAANDLRGN 857
                               56789999***************998655.59***************..**********************965 PP
7B348.61.5e-15917996587
                               -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-.TTHHHHHHHHT--TT-EEEEEE-SS CS
                        B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvlt.kGWkeFvkangLkegDfvvFkldgr 87 
                               ++++++ ++  l+lp  fa+++g+ +++  +++l de+ r+W+v l     + +++++ +GWk+F kang+++gD+  F+l+++
  Peaxi162Scf00045g01642.1 917 TIKPYTIANTVLYLPMAFAKSNGLLNRS--EMILVDEKRRTWTVLL--GPMGHQFIIKrGGWKRFMKANGVRVGDSYKFELINN 996
                               56899999999***********988555..8***************..7777776555399*******************9985 PP
8B339.87.9e-13100010701899
                                --HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                        B3   18 lpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99  
                                lp  f+ ++ +g k+   +  +  + g++W vkl  ++++    +++GW+eF+++++L++g ++vFk++g++ef   v++f++
  Peaxi162Scf00045g01642.1 1000 LPIGFL-KYlKGTKN---DHAVLRRAGKKWLVKL--NGHR----FEEGWEEFAEEHDLQSGNMLVFKHEGDMEF--EVTIFDS 1070
                                666777.44344433...4567789*********..7777....9***********************999999..9999986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM010194.9E-14596IPR003340B3 DNA binding domain
PfamPF023621.2E-15993IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.107.8E-171592IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019363.14E-161893IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086312.3931895IPR003340B3 DNA binding domain
CDDcd100175.03E-141893No hitNo description
Gene3DG3DSA:2.40.330.103.0E-18133231IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019365.69E-18136231IPR015300DNA-binding pseudobarrel domain
CDDcd100175.75E-17138232No hitNo description
PROSITE profilePS5086312.548139233IPR003340B3 DNA binding domain
SMARTSM010194.1E-14140228IPR003340B3 DNA binding domain
PfamPF023623.9E-13142230IPR003340B3 DNA binding domain
SMARTSM010191.7E-9229306IPR003340B3 DNA binding domain
PfamPF023622.6E-10241305IPR003340B3 DNA binding domain
SuperFamilySSF1019368.63E-15246308IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.103.2E-16249319IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086311.942251306IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.2E-13362454IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086311.166363457IPR003340B3 DNA binding domain
SuperFamilySSF1019362.75E-16363455IPR015300DNA-binding pseudobarrel domain
SMARTSM010196.1E-13363458IPR003340B3 DNA binding domain
PfamPF023622.5E-12367453IPR003340B3 DNA binding domain
CDDcd100175.93E-12369439No hitNo description
Gene3DG3DSA:2.40.330.101.6E-22631728IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019362.75E-20633728IPR015300DNA-binding pseudobarrel domain
CDDcd100174.74E-15637724No hitNo description
PROSITE profilePS5086313.451638726IPR003340B3 DNA binding domain
SMARTSM010191.7E-14639726IPR003340B3 DNA binding domain
PfamPF023622.2E-11643725IPR003340B3 DNA binding domain
SuperFamilySSF1019366.47E-14779858IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.108.8E-14779858IPR015300DNA-binding pseudobarrel domain
CDDcd100171.06E-10783855No hitNo description
PROSITE profilePS508639.178784878IPR003340B3 DNA binding domain
SMARTSM010191.9E-6784873IPR003340B3 DNA binding domain
PfamPF023621.7E-10786857IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.5E-18907997IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019363.14E-18908997IPR015300DNA-binding pseudobarrel domain
CDDcd100171.26E-159121006No hitNo description
PROSITE profilePS5086312.9999131008IPR003340B3 DNA binding domain
SMARTSM010195.4E-149141003IPR003340B3 DNA binding domain
PfamPF023624.1E-14917997IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.104.4E-169991073IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019363.92E-1410001073IPR015300DNA-binding pseudobarrel domain
PfamPF023621.9E-910001070IPR003340B3 DNA binding domain
SMARTSM010191.7E-410041071IPR003340B3 DNA binding domain
PROSITE profilePS5086311.63210171071IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1133 aa     Download sequence    Send to blast
MQQKNQIPKS SHAQIPQVIP TQFARRNKLN NRKCTISMRD EQRSWTFSLY TSGRNTYFGR  60
GWREFCIENR VKEGDRLMFE IVSNGETPVF RFYGKGNAPL QPRRKKTNLD VQSNGIVNSY  120
TTAPKAQASA SISANANPHF VSTIQPYSID HHFLYLPSVF AKTNGLFNRR CEMILINEKW  180
RSWSVHLRPM SHHTGIYRGW KQFKEANDVQ LGDTFKFELI NNEELPVVYF HCKYAGKDAP  240
GIREALDKEH VVLRRAGKKW LVKFNGRQLE EGWGKFVEEH DLQLGDVLVF RHEGDMEFKV  300
TIFDSSHCDR ELPEHLQEEA KVRTVVGASK KVVKDKPNPR VASSSEAFRC AEASTYNHVG  360
QSHVEFTVKP YCLSNGYFRL PKDFAMANGL TNKKCGLIIR DERQRSWNFR LYTSYSNVYV  420
GGKWGKFCVA NDLQVGDHIR CEVVSNGEKP IWKFHDSRGS PSLKPEIKKN NLDDKRISDK  480
GLHFQEQTDL KIKSSNVTAP KSQISASTSS DDANPYFIST IKPYIITNTV LFMKANGVQV  540
GDNYKFELIN NGSDGSKPIA YFYCEYFFVS LKFHDTINLG GSPLLQPEVK KNSLDDIRIS  600
DKGLHFQEQT DFRIKTSDMT ASISQVFAST SADDANPHFI STIKPYIITN PVLKIPVGFL  660
NYLKGHEQEH VVLRRAGKKW LVKLNDHRLE EGWGKFAEEH DLQLGDILVF RYEGDMEFDV  720
SIFDSSQCDR DYAKHLQEAA EAHTVEETSK KFNTDTPNPI IMSSSKAFAE AATHNPSGQD  780
DLPYFISTIK PYSISKAVLY LPMGFAKSNG LKIGKCKMIL KDEAHRSWSV QLGKYGNNFG  840
ITCGWTQFRA ANDLRGNPSL QPEVKKKTLD SKRIPDKGLH FQVHTDLRIK TSDVTVPRSK  900
VAAPTSADDA NPHFVSTIKP YTIANTVLYL PMAFAKSNGL LNRSEMILVD EKRRTWTVLL  960
GPMGHQFIIK RGGWKRFMKA NGVRVGDSYK FELINNGPKL PIGFLKYLKG TKNDHAVLRR  1020
AGKKWLVKLN GHRFEEGWEE FAEEHDLQSG NMLVFKHEGD MEFEVTIFDS NHCEREYAEY  1080
LHEQEQDAHT FEEKPNTRIM LSSKDFHHAE EAHIVNNTSK KFESQSKILR VHN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32215171
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.12e-40B3 family protein