PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00047g02131.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 536aa    MW: 58312.1 Da    PI: 5.9704
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00047g02131.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.46.8e-29230287260
                               --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                               +DgynWrKYGqK v+g+ef+rsYY+Ct+++C +kk+ver + d+++++++Y g+H+h+k
  Peaxi162Scf00047g02131.1 230 EDGYNWRKYGQKLVRGNEFTRSYYKCTYSNCLAKKQVERYH-DGHITDVHYIGKHEHPK 287
                               7****************************************.***************85 PP
2WRKY102.81.9e-32406463259
                               --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                               +Dg++WrKYGqK vkg+++prsYYrC+sagCpvkk+ver+++dpk+v++tYeg+H h+
  Peaxi162Scf00047g02131.1 406 NDGHRWRKYGQKFVKGNPNPRSYYRCSSAGCPVKKHVERASHDPKLVITTYEGQHVHD 463
                               8*******************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-24223287IPR003657WRKY domain
PROSITE profilePS5081121.172224288IPR003657WRKY domain
SuperFamilySSF1182904.05E-23228286IPR003657WRKY domain
SMARTSM007742.1E-30229287IPR003657WRKY domain
PfamPF031062.4E-22230286IPR003657WRKY domain
Gene3DG3DSA:2.20.25.809.7E-35391464IPR003657WRKY domain
SuperFamilySSF1182902.48E-28397464IPR003657WRKY domain
PROSITE profilePS5081134.084400465IPR003657WRKY domain
SMARTSM007744.1E-38405464IPR003657WRKY domain
PfamPF031063.5E-26406462IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 536 aa     Download sequence    Send to blast
MGTPREEASG EVSSENLQQK PDPEPATNKS ELKEKGSCTS MSDDGVSGEP QKRLSPDVDT  60
QASKSNQEES AHPSTCQEVS NKIQLSQCDE GVSVSQSNQE NISLSGIQEK ESENVPQKQS  120
LESKGDASVC SQLPILPEDS DAKSYGSESG VNNKAISLSP GKASDSLSQI KSQDVELIVS  180
QSDQQIMTYS IGPEKALDKL QPRRNPDTSA LGFPSDQGST PSRALEKPSE DGYNWRKYGQ  240
KLVRGNEFTR SYYKCTYSNC LAKKQVERYH DGHITDVHYI GKHEHPKSLT GPRIAPDMAL  300
PLEMRQLDMP IITTSEGEKS TVPGETCQPS KPSEAQLPRE IVSGGGGAKV TPLKPHKSED  360
KVDKDGGPES KRQKKDIAIA EDTPPIKSHS EPRHIVQTVS EVDIINDGHR WRKYGQKFVK  420
GNPNPRSYYR CSSAGCPVKK HVERASHDPK LVITTYEGQH VHDTMPTSRT AGQITAGPDA  480
STTGVSGESR FESDENRHVG QSISESGENK HVGESKSESG ENKHVGVDMV VDIGAN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-31393466275WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016484259.10.0PREDICTED: probable WRKY transcription factor 20 isoform X2
TrEMBLA0A1S4B5W60.0A0A1S4B5W6_TOBAC; probable WRKY transcription factor 20 isoform X2
STRINGXP_009775524.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45582242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.13e-73WRKY family protein