PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00050g00086.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 221aa    MW: 24701 Da    PI: 9.4538
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00050g00086.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.6e-19124173255
                       AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                               +y+GVr++k +g+W+AeIrd      k++r +lg+++ta+eAa a+++a+ +++g
  Peaxi162Scf00050g00086.1 124 KYRGVRQRK-WGKWAAEIRDaK----KKTRLWLGTYDTAYEAALAYDRAAIEIKG 173
                               8*******9.**********55....46***********************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.2E-14124173IPR001471AP2/ERF domain
PROSITE profilePS5103221.404124181IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-20124180IPR016177DNA-binding domain
SMARTSM003801.2E-32124187IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.8E-28124179IPR001471AP2/ERF domain
CDDcd000181.86E-30124179No hitNo description
PRINTSPR003672.3E-10125136IPR001471AP2/ERF domain
PRINTSPR003672.3E-10147163IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    Send to blast
MASKEELQKN DAAEKPSELV AVKKPSELDA VHSDAVGRPS ELDAVEKPIN QVGECSVVLP  60
RIVRIHMPDS SSDEEEKAGG EKSQRYEKTC VKEIIIENGR TKVISTKKYK VKKDIKPLQG  120
NVNKYRGVRQ RKWGKWAAEI RDAKKKTRLW LGTYDTAYEA ALAYDRAAIE IKGADAFTNI  180
LKPPPREANS DEPPPREVNS DKSPLREVNN KKPPSLPTDD A
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-17125179358ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A5e-17125192670ATERF1
3gcc_A5e-17125192670ATERF1
5wx9_A3e-161231891376Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016577764.15e-60PREDICTED: ethylene-responsive transcription factor CRF3-like isoform X2
RefseqXP_016577773.15e-60PREDICTED: ethylene-responsive transcription factor CRF3-like isoform X2
RefseqXP_016577781.15e-60PREDICTED: ethylene-responsive transcription factor CRF3-like isoform X2
TrEMBLA0A2G3DF996e-59A0A2G3DF99_CAPCH; Uncharacterized protein
STRINGXP_009627599.19e-57(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11140.13e-18cytokinin response factor 1