PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00054g00047.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 443aa    MW: 49336.3 Da    PI: 6.9786
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00054g00047.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.52.7e-09259306455
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Peaxi162Scf00054g00047.1 259 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 306
                               8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.41E-17253323IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.16E-10253310No hitNo description
Gene3DG3DSA:4.10.280.101.3E-16255321IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.663255305IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.1E-6259306IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-10261311IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 443 aa     Download sequence    Send to blast
MEKDYFINSG IPPPLQFEPT MPFPSWNSSW DHHSSDHQFN PFDSTLNSIV TSPYINNNTN  60
NSTNNSCYTT TPNNSPPKLH IPSMMRKDNL PNLESSLPLN PLSTDPGFAQ RAAKFSCFGS  120
RSFNGRTTSP LGLNNNAELS HRSTQQFKNG KLPRVSSSPA LKQSGSLLQI KNLSKLCNSN  180
ESGSEPSGET GSKTPTELNS RKRKSVSRRC KQVPEGNETE NGIVNMEEPK DNEDEKEAKP  240
EPPKDYIHVR ARRGQATDSH SLAERVRREK ISERMKLLQD LVPGCNKVTG KALMLDEIIN  300
YVQSLQRQVE FLSMKLSSVN SSLDFPVENL LPKDICQPNG ALPQPVLPSY QQPRQPPQMH  360
TDIPSGALSQ CSMDTLDTSL CRSLGIQLPS LDGFGEYLNQ YPTMCEDDLQ SIVQMGFTQN  420
PNKDLALQGF PVPNQTSHMK IEM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1199204SRKRKS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009757727.10.0PREDICTED: transcription factor bHLH62-like
RefseqXP_016477458.10.0PREDICTED: transcription factor bHLH62-like isoform X1
TrEMBLA0A1S4AM050.0A0A1S4AM05_TOBAC; transcription factor bHLH62-like isoform X1
TrEMBLA0A1U7UNK70.0A0A1U7UNK7_NICSY; transcription factor bHLH62-like
STRINGXP_009757727.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10572383
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07340.11e-78bHLH family protein