PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00057g00084.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family NAC
Protein Properties Length: 378aa    MW: 41987.6 Da    PI: 4.5592
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00057g00084.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM30.21.3e-092811820128
                       NAM  20 kkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkk 104
                                + ++g++++  +vi++ + y+++P++Lp      + +w f +++++         +  k+g W a+g+  e+++ +++  g ++
  Peaxi162Scf00057g00084.1  28 DQIIRGSPIPD-DVIDD-NPYQYDPSNLP------DGSW-FLVRSAEI--------KESKHGSWIAKGEACEIFA-NSSICGWRT 94 
                               55566666666.55554.78888888888......2234.33333332........234689*************.999****** PP

                       NAM 105 tLvfykgrapkgektdWvmheyrl 128
                               t+ f++ +a+  +k  W+m+ey++
  Peaxi162Scf00057g00084.1  95 TFEFFEVQASIEQKNVWMMQEYKI 118
                               **********************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100515.3299140IPR003441NAC domain
SuperFamilySSF1019417.98E-1418138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    Send to blast
MCPLAPAAPP PGPISSFWTD GQICLSLDQI IRGSPIPDDV IDDNPYQYDP SNLPDGSWFL  60
VRSAEIKESK HGSWIAKGEA CEIFANSSIC GWRTTFEFFE VQASIEQKNV WMMQEYKITQ  120
KGEHDQTKSK ESALCRVFSC CNENLNSDMK PENKNDDLTL NLLSVFGSVT PHASSNHGER  180
SIGESQVKNQ IEGIGSSPGD KFRDFSDDDI VAELDCILRE DYIELDDLRD VSSHSSSSVN  240
SRRQSLASDE CFDFLELRDL DDEMNQALHG KGSTSNYNIM MCRIPNDVFM QPAPLESLVG  300
GSGVAAKDAQ QVPANKVEFT SNPSPDQAVK RLKAEYRDEG SSSSSRATAS SSSSDEPGSR  360
REEKRKKKLK KYLCFMPF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1359365RREEKRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009758709.11e-150PREDICTED: NAC domain-containing protein 19-like
RefseqXP_016452711.11e-150PREDICTED: NAC domain-containing protein 19-like
TrEMBLA0A1S3YKE01e-149A0A1S3YKE0_TOBAC; NAC domain-containing protein 19-like
TrEMBLA0A1U7V8W21e-149A0A1U7V8W2_NICSY; NAC domain-containing protein 19-like
STRINGXP_009758709.11e-150(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA112072123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07680.27e-08NAC domain containing protein 80