PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00059g00714.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 455aa    MW: 50460.4 Da    PI: 7.3775
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00059g00714.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.18.9e-29199257259
                               --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                               +Dg++WrKYGqK  +g+++prsYYrC+ a  Cpv+k+v+r+ ed +v+++tYeg+Hnh+
  Peaxi162Scf00059g00714.1 199 NDGCQWRKYGQKISRGNPCPRSYYRCSVApLCPVRKQVQRCVEDMSVLITTYEGTHNHS 257
                               8***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.6E-30183259IPR003657WRKY domain
SuperFamilySSF1182901.7E-25190259IPR003657WRKY domain
PROSITE profilePS5081127.428193259IPR003657WRKY domain
SMARTSM007744.4E-34198258IPR003657WRKY domain
PfamPF031062.7E-25199256IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006952Biological Processdefense response
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 455 aa     Download sequence    Send to blast
DDEFKSAIEE VHEVRLENAR LKMLLEQLEK DYNSLQTRFF NICQPDIKKS ASPTCTPESI  60
EEEEHDLVSL RLGRSPSRNE PKKVDKKRSY CRTGEDYHIS DQSNDVLKLG LDYRIEVSNS  120
DLIKPYMVPI SDKVEEPKAQ DFRESGPISE VVKPIRRGDS EVSEPTPNVK RVGDDEVSQP  180
NVKRARVSVR TKCDYPTIND GCQWRKYGQK ISRGNPCPRS YYRCSVAPLC PVRKQVQRCV  240
EDMSVLITTY EGTHNHSLPI EATAMASTTS AAASMLLSGS TSSQSAKDFT NLPNNTKTQP  300
LYLSSSSTNP NPFPTITLDF TTFPTTSSFT SFNFPSNFQS STGLPSNSLS FTSPESSTLS  360
KILGSAYVNY DTTSTLPYNK NLINIGSSNL ERPPHAQKQF DQPILGKNNT SSNKLKEVSS  420
QQALTETLTK AITSDPSFQN VLAAAISSMV GATKT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-22185259174WRKY transcription factor 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009600779.10.0PREDICTED: probable WRKY transcription factor 72
TrEMBLA0A1S3WX580.0A0A1S3WX58_TOBAC; probable WRKY transcription factor 72
STRINGXP_009600779.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA128051921
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.11e-59WRKY DNA-binding protein 72