PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00065g01127.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 252aa    MW: 28672.1 Da    PI: 6.0472
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00065g01127.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.13.8e-1497144355
                               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               + h ++Er+RR+++ ++f eL  llP +     kK++Ka+iLe+A++++k+Lq
  Peaxi162Scf00065g01127.1  97 QEHIIAERKRREKLSQRFVELSALLPGL-----KKVDKASILEQAIKCVKELQ 144
                               6799************************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.26994143IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.3E-1197144IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.67E-1798163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.7E-1698157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.16E-1399148No hitNo description
SMARTSM003533.6E-13100149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MCWCNLQGEG AYYSNENKSL DDFTTQKSTT SEDQETTELS LYPPNTRHAS GSYFNQESKS  60
KSCENHQHKM NNNINVNSDP SDQGCKIEPS KSFNGHQEHI IAERKRREKL SQRFVELSAL  120
LPGLKKVDKA SILEQAIKCV KELQEKVQLL EEQKNTSRSI MFVNKSQLEE EDDNYSSSDE  180
IKSHGSIITD DLPLDIEARF SDKNVLIAIT CARRTGFLLK IYDEIEKLHL TIVNSSMMPF  240
GKHANHVTIV AQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102107ERKRRE
2103108RKRREK
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By ethylene (ACC) and jasmonic acid (JA) treatments. {ECO:0000269|PubMed:12679534}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009791053.14e-81PREDICTED: transcription factor bHLH18-like
RefseqXP_016480480.14e-81PREDICTED: transcription factor bHLH18-like
SwissprotQ9T0721e-41BH025_ARATH; Transcription factor bHLH25
TrEMBLA0A1S4AV821e-79A0A1S4AV82_TOBAC; transcription factor bHLH18-like
TrEMBLA0A1U7XJJ51e-79A0A1U7XJJ5_NICSY; transcription factor bHLH18-like
STRINGXP_009791053.12e-80(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA136021316
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-32bHLH family protein