PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00066g02121.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

FAR1

Protein Properties

Length: 174aa MW: 19952.4 Da PI: 9.1503

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00066g02121.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	86.7	3.5e-27	48	134	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 +fY +YA++ GFsvr+ + +ks+++++i+ ++fvCskeg+r++++ k ++r++ tr gCk l v+k++d+kw v +l+++H Peaxi162Scf00066g02121.1 48 NFYLDYAHRNGFSVRRGRVTKSRKDKSIIGQEFVCSKEGFRSKKNLK---SNRPQDITREGCKVLLYVSKKEDAKWAVCRLVSNH 129 6***************************************98877...999**************************** PP FAR1 86 nHela 90 nHela Peaxi162Scf00066g02121.1 130 NHELA 134 *97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	3.0E-24	48	134	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 174 aa Download sequence Send to blast
MENSNIDEQN EIGSDMDGTT PFVPSSGVEN HKDLYIGMEF SSLDDSFNFY LDYAHRNGFS 60 VRRGRVTKSR KDKSIIGQEF VCSKEGFRSK KNLKSNRPQD ITREGCKVLL YVSKKEDAKW 120 AVCRLVSNHN HELATPNSQK FLRSKRKKSE AQKNLIDLLD DSGVRPDHLL PHNF

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015167012.1	1e-79	PREDICTED: protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A3Q7EE03	2e-71	A0A3Q7EE03_SOLLC; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA645	8	60

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-26	FAR1-related sequence 5