PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00071g00210.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 723aa    MW: 77363 Da    PI: 7.9136
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00071g00210.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.43.5e-15521567455
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                hn  Er+RRdriN+++  L+el+P++      + +Ka++L +A+eY+k Lq
  Peaxi162Scf00071g00210.1 521 VHNLSERKRRDRINEKMRALQELIPNC-----NRADKASMLDEAIEYLKTLQ 567
                               6*************************8.....69*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.33E-20514585IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.835517566IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.04E-16520571No hitNo description
PfamPF000101.8E-12521567IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.8E-19521575IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.4E-16523572IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 723 aa     Download sequence    Send to blast
MPLSEFLKRA GKLGSAQQKM ASTTDLSSFP ENEFVELVWE NGQLMMQGQS SRAKKRTTFN  60
NLSSNASNIR VLENSSTSKI GKCGAMNSML NDMPLSVPTR EVDTSQEDDV VPWLSYSADD  120
SLQQDYCSQL LPHISGVAAN EPARQMTGGS HSVPIHNVEN LEQRNASKIS PNSRFSMLCS  180
WSPQKGHASV PSLGSGFSDI VSSNTSNATS SQSGFATLDK KGCSDRSIGG SHNVQIHNDS  240
LEQRSTPKVY PTSRFGQLSS WSPQKGHASV PSLGSGVSNI VSRNTINNPV SGFGNSNQSQ  300
ASDGGIKRMT IQKQNMTSGD SSLFNFSHFS RPSTFHKGSL NGESAVAGST VEAVKGNNEG  360
GNVASCSNPV SANPVEPHFS SEKENDLHFQ PKMASSKVDL RTSLPSHLDR SCPVEQSDNL  420
CRDNMSNNDK SPGQFTGESA TKEYPEGKRN VEPAVACSSV CSASSAERAS SAQPHNRKRK  480
SHDNEESGCR SEDAEEESFG VKRAGHVHRS AGSKRGRAAE VHNLSERKRR DRINEKMRAL  540
QELIPNCNRA DKASMLDEAI EYLKTLQLQI QIMSMGAGLC APPMMYPMGM GHMPATHMPH  600
FSPMGLRMGM GFGMGMHDNG GSPGCPIFPM PTPPQGAHFP SLPVTGSTIF PALSGYNLHA  660
FGHPGQGPPI SAPQAPFVPL AGQPSKSSAV GLNAARTGVH ADTPSQVQAT NEAQDKSAFV  720
AEK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1477481KRKSH
2525530ERKRRD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009774964.10.0PREDICTED: transcription factor PIF3-like isoform X2
RefseqXP_016473140.10.0PREDICTED: transcription factor PIF3-like isoform X2
TrEMBLA0A1S4A9230.0A0A1S4A923_TOBAC; transcription factor PIF3-like isoform X2
TrEMBLA0A1U7WJW60.0A0A1U7WJW6_NICSY; transcription factor PIF3-like isoform X2
STRINGXP_009774962.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA49652437
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.22e-38phytochrome interacting factor 3