PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00074g00078.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family B3
Protein Properties Length: 219aa    MW: 25424.9 Da    PI: 5.2152
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00074g00078.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.51e-12106194780
                               .-HHHHT.T-EE--HHH.HTT..............---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--T CS
                        B3   7 psdvlks.grlvlpkkfaeeh..............ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLke 76 
                               +sdv +  +r+ +p   ++++              ++ +e+s +++++d++g+  ++k++ + + ++ vl  GW++ vkan+L+ 
  Peaxi162Scf00074g00078.1 106 QSDVKSAlSRFFIPTGTCNANilnnlnseerkkleNQHSERSLEVRVMDPKGNIHKMKFTRWLSLNQLVLNHGWNKLVKANDLQK 190
                               66666555999*******999***9999988888755556999****************99************************ PP

                               T-EE CS
                        B3  77 gDfv 80 
                               gD++
  Peaxi162Scf00074g00078.1 191 GDTI 194
                               **97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF037547.5E-1093184IPR005508B3 domain-containing protein
Gene3DG3DSA:2.40.330.103.7E-1498203IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.96E-1499204IPR015300DNA-binding pseudobarrel domain
CDDcd100173.35E-14102215No hitNo description
PROSITE profilePS508639.291149217IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MTKIRIFGKD FKSIKLFGEW VTVSLEKEQE PGLMLQEEQE PGLMLQEEQE PGLMLQEEQE  60
AGQILQEEQE EGVIQRDLPL PNNMYEAIQL AGGSEPVYIG RKKVEQSDVK SALSRFFIPT  120
GTCNANILNN LNSEERKKLE NQHSERSLEV RVMDPKGNIH KMKFTRWLSL NQLVLNHGWN  180
KLVKANDLQK GDTIDLWHFR ISSEQYPYFA INIIKNQNR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA116791115