PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00074g01125.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 283aa    MW: 32307 Da    PI: 5.1139
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00074g01125.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY51.32.3e-16791212059
                               S-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY  20 fprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                               f rsYYrCt++   +C+++k+v+rs++dp+++e tY+g+H+++
  Peaxi162Scf00074g01125.1  79 FCRSYYRCTYRlmqNCWATKQVQRSDDDPTLFELTYKGSHTCN 121
                               68********9999***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007747.2E-1473122IPR003657WRKY domain
SuperFamilySSF1182909.81E-1478122IPR003657WRKY domain
PfamPF031065.2E-1479120IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.3E-1479122IPR003657WRKY domain
PROSITE profilePS5081111.25681123IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MECGFNWEYN SLINELTQGM EHAKQLNAYL SSFENQELHV HMQMILSSYE KSLSILKWTG  60
SITQTPQIVA PLVSTDFLFC RSYYRCTYRL MQNCWATKQV QRSDDDPTLF ELTYKGSHTC  120
NQAIHSATQP KSPEKHEFKK QASFSRMQSN QMLANLQANL RVNTNDLDKN EATCSFQFSP  180
TFSGFVDENL HFQMSQVDDN LVGGYSPSFV SPTTPESNYF SVSSCQMNGS RKVHSLNHSE  240
SDLPELFSAN TSSTSSPIVG LEFPLEHVEL DPNFPFDNLE FFR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0092951e-161AP009295.1 Solanum lycopersicum genomic DNA, chromosome 8, clone: C08SLe0011M12, complete sequence.
GenBankHG9755201e-161HG975520.1 Solanum lycopersicum chromosome ch08, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006343875.11e-144PREDICTED: probable WRKY transcription factor 53
TrEMBLM1AW241e-143M1AW24_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000316951e-143(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA18432467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.11e-28WRKY family protein