PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00074g01735.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 184aa    MW: 20993 Da    PI: 7.8817
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00074g01735.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY52.31.1e-161261632259
                               EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY  22 rsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                               +sYYrCt+++C+vkk+++r ++d+++v++tYeg Hnh+
  Peaxi162Scf00074g01735.1 126 KSYYRCTHHTCNVKKQIQRHSKDTSIVVTTYEGIHNHP 163
                               79***********************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182908.24E-14115164IPR003657WRKY domain
SMARTSM007742.3E-12121164IPR003657WRKY domain
PfamPF031064.5E-12126163IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.7E-13126163IPR003657WRKY domain
PROSITE profilePS5081115.468126165IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MDAGEEPPPP PPPPLPPPPL LSNDLSPASF FMQPMNNNSQ VIGCDNNIDW TALLSGSINN  60
CHEQTMMPNV SITPRNITMM EGEQQHQQHG IISCRDKGKI RKRKYVPPRI AFHTRSTEDI  120
LDDGFKSYYR CTHHTCNVKK QIQRHSKDTS IVVTTYEGIH NHPCEKLMET LSPFLKQLQF  180
LSRF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9755202e-55HG975520.1 Solanum lycopersicum chromosome ch08, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016496500.11e-77PREDICTED: probable WRKY transcription factor 45
TrEMBLA0A1S4C5P03e-76A0A1S4C5P0_TOBAC; probable WRKY transcription factor 45
STRINGXP_009598201.19e-76(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA63742433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64000.11e-40WRKY DNA-binding protein 56