PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00082g00119.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family Trihelix
Protein Properties Length: 329aa    MW: 36546.1 Da    PI: 9.7466
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00082g00119.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix51.82.2e-1638122186
                  trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 
                               +W++  v +L+ea++ ++   +r+klk+++We+v+k++    ++++  ++++qCk+k+e+++kry+ + +++ +      s++p+
  Peaxi162Scf00082g00119.1  38 EWSEGAVSCLLEAYETKWILRNRAKLKGQDWEDVAKHVsaraSSTKSPKTQTQCKNKIESMKKRYRSESATAADA-----SSWPL 117
                               5*************************************87777777788999******************99984.....57*** PP

                  trihelix  82 fdqle 86 
                               +++l+
  Peaxi162Scf00082g00119.1 118 YSRLD 122
                               *9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138377.3E-2036122No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MDKEVGNHQE NSNKLDDLSP KNKQQNNYNS SDRLKRDEWS EGAVSCLLEA YETKWILRNR  60
AKLKGQDWED VAKHVSARAS STKSPKTQTQ CKNKIESMKK RYRSESATAA DASSWPLYSR  120
LDLLLRGNNN TSSSIVTPPV AAAVVVEPPQ PAAVPPLPPV HVPQPLPPDK TGTDLPVGNG  180
GGQNSHDSNG DLDRGVKEDI MDAKLSDNAS DKNAMDTNSS TPALYSDEKS KSKNVKLRMQ  240
EKRLKKRKRE GWEVAESIRL LAEVVVRSEQ ARLETMKEIE RMRAEAEAKR GEMDLKRTEI  300
IANTQLEIAK LFASISSKGV DSSLRIGRS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1241247KRLKKRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754404e-61HG975440.1 Solanum pennellii chromosome ch01, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009778178.11e-154PREDICTED: formin-binding protein 4
RefseqXP_016450737.11e-154PREDICTED: trihelix transcription factor ASIL2-like
TrEMBLA0A1S3YFD01e-153A0A1S3YFD0_TOBAC; trihelix transcription factor ASIL2-like
TrEMBLA0A1U7WHQ61e-153A0A1U7WHQ6_NICSY; formin-binding protein 4
STRINGXP_009778178.11e-153(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA122511620
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54390.11e-99sequence-specific DNA binding transcription factors