PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00086g00028.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family NAC
Protein Properties Length: 191aa    MW: 22264.3 Da    PI: 9.5864
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00086g00028.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM153.68.7e-48471722128
                       NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWka 85 
                               ppG+rF P+d+el+v+yLkkkv +++l+  + i ev++ ++ P++L  + +  +e+ewyfF++rd+ky++g+r+nra+  gyWka
  Peaxi162Scf00086g00028.1  47 PPGYRFCPRDDELIVHYLKKKVMNEPLPY-DNIVEVNLSQYSPQQLSeTYAMVGENEWYFFTPRDRKYRNGTRPNRAAGIGYWKA 130
                               9****************************.88**************8445556899***************************** PP

                       NAM  86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                               tg dk++++ k+ +vg +k Lvfy+g+ +kgekt+W+mheyr+
  Peaxi162Scf00086g00028.1 131 TGADKPIKH-KSVTVGFRKALVFYEGKPQKGEKTNWIMHEYRV 172
                               *********.999****************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.07E-5242177IPR003441NAC domain
PROSITE profilePS5100548.81846191IPR003441NAC domain
PfamPF023655.8E-2747172IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
TPQRVNVSSL TMADEQSEAN LKPCCTTQKP KTEKQEQEQQ KVSFTFPPGY RFCPRDDELI  60
VHYLKKKVMN EPLPYDNIVE VNLSQYSPQQ LSETYAMVGE NEWYFFTPRD RKYRNGTRPN  120
RAAGIGYWKA TGADKPIKHK SVTVGFRKAL VFYEGKPQKG EKTNWIMHEY RVNGSCVARK  180
DENDMRVRIF P
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-51351724140Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor of the NAC family associated with male fertility. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009769770.13e-82PREDICTED: NAC domain-containing protein 67-like
SwissprotA2YMR03e-53NAC10_ORYSI; NAC transcription factor ONAC010
TrEMBLA0A1U7W6778e-81A0A1U7W677_NICSY; NAC domain-containing protein 67-like
STRINGXP_009769770.11e-81(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA74624103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.14e-54NAC domain containing protein 32