PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00094g01124.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family FAR1
Protein Properties Length: 175aa    MW: 20377.3 Da    PI: 9.384
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00094g01124.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR156.87.7e-1854125175
                      FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgk 75 
                               kfY +YA++  Fsvr+ + +ks+++++i+ ++fvCskeg+r++++ +   ++r+r +tr gCk  l v+k+++g+
  Peaxi162Scf00094g01124.1  54 KFYLDYAHRNDFSVRRGRITKSRKDKSIIGQEFVCSKEGFRRKKNLE---SNRPRDVTREGCKVLLYVSKKEEGN 125
                               6*****************************************98777...999*****************98765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031018.6E-1554125IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    Send to blast
MKNSNLDEQN IKGVEVRLEE SDMDGSEQAP YVGVENSREP YIGMDFQSLD DLFKFYLDYA  60
HRNDFSVRRG RITKSRKDKS IIGQEFVCSK EGFRRKKNLE SNRPRDVTRE GCKVLLYVSK  120
KEEGNLGLFS STIMSMHLQI VKSSCDQKEK SQRRKRALLI YLIAPEFVQV KLHQC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015167012.14e-55PREDICTED: protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A3Q7EE031e-43A0A3Q7EE03_SOLLC; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA645860
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.12e-15FAR1 family protein