PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00096g00126.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 340aa    MW: 38632.4 Da    PI: 6.0077
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00096g00126.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.21.7e-14167213354
                               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                               + h  +Er+RR+r+ ++f +L +l+P +     kKl+Ka+iL  A++YIk+L
  Peaxi162Scf00096g00126.1 167 QDHVLAERKRRERLTQSFITLSSLIPDL-----KKLDKASILGDAIKYIKQL 213
                               56999***********************.....9*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.075164213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.7E-12167213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.1E-17168230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.58E-17169231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.91E-14169218No hitNo description
SMARTSM003534.1E-16170219IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MDISSWSEME IMNTNDLQYI DHHYQTMNPF DEFPYNNNPF SSYTYNNVQS SQVAEIFEEK  60
PVFLSSRIET HQNTSNFSSP SPSSSPSVIS FSNSPTATPA QKYFENLNTP VKTEVPSSGT  120
TINFSASSIS MDSDFDDSQH LIQALGFEAG DFSHEKKSYS RTPLQAQDHV LAERKRRERL  180
TQSFITLSSL IPDLKKLDKA SILGDAIKYI KQLAEQVKTL EEQAKKCNEE PVVAVKRARI  240
QSSYDNSNST STEKSVPEIE VRVSDGNILI RIYCKKQPAL MKEIFSQVEK FHLTIISSSV  300
IPFGYTNNHI TIIAQMDHQL SIMKEEHVVN KMRETIMKLM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1172177ERKRRE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006357745.11e-149PREDICTED: transcription factor bHLH18-like
TrEMBLA0A1U8G0M31e-143A0A1U8G0M3_CAPAN; transcription factor bHLH18-like
STRINGXP_009605673.11e-137(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45081443
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.11e-44bHLH family protein