PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00098g00710.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

Protein Properties

Length: 70aa MW: 8004.23 Da PI: 7.2538

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00098g00710.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	31.5	3.2e-10	32	69	59	96
EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 59 yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 + l+kGW+++v++n L +gD++ Fkl++++ f l +++ Peaxi162Scf00098g00710.1 32 IQLKKGWSKYVEDNALYVGDVCAFKLIDDKLFILEISI 69 5689***********************98888666655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50863	9.023	1	70	IPR003340	B3 DNA binding domain
Gene3D	G3DSA:2.40.330.10	8.6E-9	29	67	IPR015300	DNA-binding pseudobarrel domain
SuperFamily	SSF101936	1.61E-8	32	66	IPR015300	DNA-binding pseudobarrel domain
Pfam	PF02362	1.1E-7	32	68	IPR003340	B3 DNA binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 70 aa Download sequence Send to blast
MENGCKKQDV NASKNEIKLH PSDEKISQTF GIQLKKGWSK YVEDNALYVG DVCAFKLIDD 60 KLFILEISIR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-