PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00104g00047.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

Protein Properties

Length: 146aa MW: 16682.2 Da PI: 7.8454

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00104g00047.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	32.8	1.3e-10	72	123	49	98
EE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEEEE- CS B3 49 kliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvkvfr 98 +++ +k + +++GW++Fv + gLkegD +vF+l + ++ +++v++++ Peaxi162Scf00104g00047.1 72 NMKLNKLCAKRRFSSGWSKFVTDTGLKEGDGLVFELLeCNnENVKFKVQILD 123 33336666666799*********************55476688888888887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.40.330.10	2.6E-11	28	123	IPR015300	DNA-binding pseudobarrel domain
SuperFamily	SSF101936	3.53E-11	29	123	IPR015300	DNA-binding pseudobarrel domain
SMART	SM01019	0.0077	30	125	IPR003340	B3 DNA binding domain
CDD	cd10017	1.09E-9	39	123	No hit	No description
Pfam	PF02362	7.2E-8	62	123	IPR003340	B3 DNA binding domain
PROSITE profile	PS50863	9.756	84	125	IPR003340	B3 DNA binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 146 aa Download sequence Send to blast
MYCNRLYRAI CSPCNSIGYN MQFVIQMNIF QQNGHNYDIS KRWFRILAPK ILQHLPATAV 60 PVTLRNGQME GNMKLNKLCA KRRFSSGWSK FVTDTGLKEG DGLVFELLEC NNENVKFKVQ 120 ILDGSFSEEL LQVLDEGTSD NPVDIL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1819	21	54