PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00106g01616.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 237aa    MW: 27193.2 Da    PI: 6.7673
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00106g01616.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.81.5e-30156214159
                               ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                               ldDg++WrKYG+K+vk+s++pr+YY+C+s +C+vkk+ver+++d ++v++tYeg Hnhe
  Peaxi162Scf00106g01616.1 156 LDDGFKWRKYGKKMVKNSPNPRNYYKCSSGSCNVKKRVERDNDDSSYVITTYEGIHNHE 214
                               59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.4E-32142216IPR003657WRKY domain
SuperFamilySSF1182901.22E-27149216IPR003657WRKY domain
PROSITE profilePS5081130.607151216IPR003657WRKY domain
SMARTSM007743.6E-35156215IPR003657WRKY domain
PfamPF031061.7E-23157214IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    Send to blast
MDNIFPYSNP NSCNIGAIYS SNFIDAPEFE LSNYLFPEDG SSNNEDFLSQ NEMTCELVQS  60
ISSSGSSYSN NYPTPRTHNM QVLYTWLLSN TIHINFQFLS FLCTFSLKIN VDDSSFVFSS  120
SVCIVNRKCT KGVRKENKVE TKSRVAFRFK SDLDVLDDGF KWRKYGKKMV KNSPNPRNYY  180
KCSSGSCNVK KRVERDNDDS SYVITTYEGI HNHESPNYVL HYTQFPPNNN PTDGLHD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-231512161277Probable WRKY transcription factor 4
2lex_A3e-231512161277Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009779355.13e-77PREDICTED: probable WRKY transcription factor 50
RefseqXP_016509832.13e-77PREDICTED: probable WRKY transcription factor 50
TrEMBLA0A1S4D8U57e-76A0A1S4D8U5_TOBAC; probable WRKY transcription factor 50
TrEMBLA0A1U7WYP07e-76A0A1U7WYP0_NICSY; probable WRKY transcription factor 50
STRINGXP_009779355.11e-76(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21242462
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.14e-38WRKY DNA-binding protein 51