PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00111g01327.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 251aa    MW: 28442.3 Da    PI: 9.3118
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00111g01327.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.91.1e-1090137655
                               HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                                 +Er+RR+++   +++Lr l+P+       +K s ++ Le+ v+Y+k+Lq
  Peaxi162Scf00111g01327.1  90 RDVERQRRRDMARLYQRLRLLIPSkY---LMGKRSISDHLEEIVDYVKDLQ 137
                               679*********************77...9********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.21484136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.83E-1084152IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.7E-788155IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.4E-890137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MDDNYDQFDY SQLDQLLHFL SSSSPPPPSP PATTTLRKQV PSVSLQTQSS NHVSHVPKRK  60
SNTINANDQD GGKGKPPKEK EPMEKKVIRR DVERQRRRDM ARLYQRLRLL IPSKYLMGKR  120
SISDHLEEIV DYVKDLQKNI EELETKRETL KKIKNICTSD NSHHLTPFSS MKSDDHEDGI  180
RVKQCKEGVE VFVSSAAADL KAGLTLSKVL RVLMEEGMLV NSCVSSNVNT RGDIDLAGLQ  240
FKLMSSSYTQ L
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019246617.11e-83PREDICTED: transcription factor bHLH120-like
TrEMBLA0A1J6IE633e-82A0A1J6IE63_NICAT; Transcription factor bhlh126
STRINGXP_009605333.19e-81(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA128311118
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.15e-11bHLH family protein