PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00121g00018.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 341aa    MW: 38039.8 Da    PI: 10.1745
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00121g00018.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.81.6e-31269326359
                               -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                               D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp ++++tYegeHnh+
  Peaxi162Scf00121g00018.1 269 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPAMLIVTYEGEHNHS 326
                               99************************988****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105335.0E-18217265IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.802.0E-33255326IPR003657WRKY domain
PROSITE profilePS5081130.699262328IPR003657WRKY domain
SuperFamilySSF1182905.23E-27264326IPR003657WRKY domain
SMARTSM007746.6E-38267327IPR003657WRKY domain
PfamPF031063.3E-27269325IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005516Molecular Functioncalmodulin binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MAVDLMSSGY QSNNFSSKME EKAVQEAANA GLQSVEKLIR LLSQSHQQTQ QQQQQKFQDS  60
PDYQEVAEVA VNKFKKFISL LDNKNRTGHA RFRRGPITNT PFKNQPQKLQ TQQPPQEQQQ  120
KIDQKPIEEK EKSQSKIYCP TPIQRLPPLP NNHHQLVKNG LKESSTTINF ATPSPANSFI  180
SSLTGDTEQS LSSGFQITNL SNVSSAGRPP LSTSSFKRKC NSLDDSSLKC SSAGGSSGRC  240
HCPKKRKSRV KRVVRVPAIS MKMADIPPDD YSWRKYGQKP IKGSPHPRGY YKCSSVRGCP  300
ARKHVERALD DPAMLIVTYE GEHNHSHSIS ETPAPHVLES S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-21255325271WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00450DAPTransfer from AT4G24240Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB0415201e-155AB041520.1 Nicotiana tabacum mRNA for WRKY transcription factor NtEIG-D48, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015074398.10.0probable WRKY transcription factor 7
SwissprotQ9STX01e-103WRKY7_ARATH; Probable WRKY transcription factor 7
TrEMBLA7UGC90.0A7UGC9_SOLTU; WRKY transcription factor 2
STRINGXP_009604893.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12202479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.13e-87WRKY DNA-binding protein 7