PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00128g00723.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ARR-B
Protein Properties Length: 577aa    MW: 63932.7 Da    PI: 6.1668
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00128g00723.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like77.31.9e-24191244155
                   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                               k+r++Wt +LH++Fv+av+q+ G +k  Pk+il+lm+v+ Lt+e+v+SHLQkYRl
  Peaxi162Scf00128g00723.1 191 KARVVWTVDLHQKFVKAVNQI-GFDKVGPKKILDLMGVPWLTRENVASHLQKYRL 244
                               68*******************.9*******************************8 PP
2Response_reg807.9e-27171251109
                               EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTH CS
              Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgee 83 
                               vl+vdD+p+ +++l+++l+k  y ev+ +  ++eal+ll+e++  +D+++ D++mp+mdG++ll++   e  +lp+i+++  ge 
  Peaxi162Scf00128g00723.1  17 VLVVDDDPTWLKILEKMLKKCSY-EVTICGLAREALHLLRERKdgFDIVISDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGET 99 
                               89*********************.***************999999**********************6644.8************ PP

                               HHHHHHHHTTESEEEESS--HHHHHH CS
              Response_reg  84 edalealkaGakdflsKpfdpeelvk 109
                               + + + ++ Ga d+l Kp+ ++el++
  Peaxi162Scf00128g00723.1 100 SRVMKGVQHGACDYLLKPIRMKELRN 125
                               ***********************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521727.68E-3614138IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23001.7E-4414162No hitNo description
SMARTSM004485.4E-3215127IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011043.71916131IPR001789Signal transduction response regulator, receiver domain
PfamPF000726.5E-2417126IPR001789Signal transduction response regulator, receiver domain
CDDcd001567.80E-3118131No hitNo description
SuperFamilySSF466895.29E-18188248IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.608.0E-28190249IPR009057Homeodomain-like
TIGRFAMsTIGR015577.0E-22191244IPR006447Myb domain, plants
PfamPF002493.8E-8193243IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0009735Biological Processresponse to cytokinin
GO:0010082Biological Processregulation of root meristem growth
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 577 aa     Download sequence    Send to blast
MMENSKNSGG FPAGLRVLVV DDDPTWLKIL EKMLKKCSYE VTICGLAREA LHLLRERKDG  60
FDIVISDVNM PDMDGFKLLE HVGLEMDLPV IMMSVDGETS RVMKGVQHGA CDYLLKPIRM  120
KELRNIWQHV LRKKMQEVRD IGSLEMDQCD EVWMLNANEV LSGKKRKEFD NKNDEKATSD  180
SRCIDSPCMK KARVVWTVDL HQKFVKAVNQ IGFDKVGPKK ILDLMGVPWL TRENVASHLQ  240
KYRLYLTRLQ KEDEVKASFC GVKHPDVSSK ETSSSLSLQN PVDVCTDVSS DKYGGVSGDK  300
TIVQNGKSNI HESKVNGVVS MPVAEPSSVV GDNFDAQTAG SKINVNNCFG LVTDVKSAKV  360
TTPYCFTGEA PQPQYKQDFK PHFESQNELS HQPLPELPHQ LPVDCTRPTG FVNILPSREE  420
KERPPGTENK ASFYKSRSTR VGKVSPVEST VNLFSFQPVG HPTNFHALGQ IPSTTWSTTS  480
HSVDQILVNG LQSSQGNLTS GSGAVVASAG EDMCGGSIQG ECFPAYTGLR IVEPFGYNDP  540
QPLSGVPTCL YDTLRFDYEY PIDSLEGTVL DQGLFIV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A3e-17190249463ARR10-B
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00010PBMTransfer from AT1G67710Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006341767.10.0PREDICTED: two-component response regulator ARR11 isoform X1
RefseqXP_006341768.10.0PREDICTED: two-component response regulator ARR11 isoform X2
TrEMBLA0A0V0IG200.0A0A0V0IG20_SOLCH; Putative two-component response regulator ARR11-like
STRINGPGSC0003DMT4000312600.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA67882433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67710.11e-114response regulator 11