PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00131g00096.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

G2-like

Protein Properties

Length: 79aa MW: 8984.4 Da PI: 7.7798

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00131g00096.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.1	9.6e-34	2	55	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prl+Wt++LH++Fv+av++LGG+++AtPk +lelm+vkgLt++hvkSHLQ+YR+ Peaxi162Scf00131g00096.1 2 PRLKWTEDLHRCFVHAVDSLGGEDRATPKMVLELMDVKGLTISHVKSHLQMYRS 55 8****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	13.549	1	58	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	3.5E-31	1	57	IPR009057	Homeodomain-like
SuperFamily	SSF46689	4.3E-16	2	56	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.9E-26	2	56	IPR006447	Myb domain, plants
Pfam	PF00249	5.1E-8	3	54	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 79 aa Download sequence Send to blast
MPRLKWTEDL HRCFVHAVDS LGGEDRATPK MVLELMDVKG LTISHVKSHL QMYRSMKHEQ 60 MIQAVATDER NHASSIAGI

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	2e-21	3	58	4	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	2e-21	3	58	4	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	2e-21	3	58	3	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	2e-21	3	58	3	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	2e-21	3	58	3	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	2e-21	3	58	3	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	2e-21	3	58	4	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	2e-21	3	58	4	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	2e-21	3	58	4	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	2e-21	3	58	4	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	2e-21	3	58	4	59	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	2e-21	3	58	4	59	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription factor.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015065526.1	2e-37	myb family transcription factor EFM-like
Swissprot	Q700D9	1e-24	MYBF_ARATH; Putative Myb family transcription factor At1g14600
TrEMBL	A0A3Q7F7B8	4e-37	A0A3Q7F7B8_SOLLC; Uncharacterized protein
STRING	Solyc02g080860.1.1	7e-37	(Solanum lycopersicum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA7450	20	29

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	2e-28	G2-like family protein