PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00148g00161.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

bHLH

Protein Properties

Length: 154aa MW: 17067.2 Da PI: 5.6809

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00148g00161.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.4	1.6e-05	119	145	4	30
HHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 4 ahnerErrRRdriNsafeeLrellPka 30 h +Er+RR+r+ + f+ L + lP + Peaxi162Scf00148g00161.1 119 DHLLAERKRRERLTQLFAALAKSLPDL 145 57889********************86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	2.18E-5	107	146	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	8.638	115	154	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.4E-4	119	146	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	3.78E-4	120	147	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 154 aa Download sequence Send to blast
MENTSYNNLE NNIGGEAPFE FPNLLSEMFS SFPNQNPSSS SLEQHGITVV KEASKVAFPS 60 PSSISSHNMI SFGNPAESNY ILGDEQDYDM MSVEKVMNLS SSSTAPPKRI SRSPLLSQDH 120 LLAERKRRER LTQLFAALAK SLPDLKKVLQ SFVL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	123	128	ERKRRE

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009794821.1	5e-50	PREDICTED: transcription factor NAI1-like
Refseq	XP_009794822.1	5e-50	PREDICTED: transcription factor NAI1-like
Refseq	XP_019249041.1	3e-49	PREDICTED: transcription factor bHLH18-like
TrEMBL	A0A1J6IQ15	7e-48	A0A1J6IQ15_NICAT; Transcription factor bhlh18
TrEMBL	A0A1U7XRY9	1e-48	A0A1U7XRY9_NICSY; transcription factor NAI1-like
STRING	XP_009794821.1	2e-49	(Nicotiana sylvestris)
STRING	XP_009794822.1	2e-49	(Nicotiana sylvestris)
STRING	XP_009623662.1	2e-48	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA12598	11	22

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22750.1	1e-09	bHLH family protein