PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00150g00001.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family NAC
Protein Properties Length: 327aa    MW: 37418.2 Da    PI: 6.9713
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00150g00001.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM82.21e-2542116277
                       NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra 77 
                               +pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nra
  Peaxi162Scf00150g00001.1  42 MPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRA 116
                               79***************************.89***************8778899*********************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.48E-2740116IPR003441NAC domain
PROSITE profilePS5100523.52141210IPR003441NAC domain
PfamPF023651.3E-1043110IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MSQSSQQQQQ DDRSSNVVNH INNKKKDHHD DNNDEHEHDM VMPGFRFHPT EEELVEFYLR  60
RKVEGKRFNV ELITFLDLYR YDPWELPALA AIGEKEWFFY VPRDRKYRNG DRPNRAEISL  120
CRVYKRPGVE DHPSLPRSLP TTKASSSSSS RAHHSIKKNH HPQVVQQDPF STNYGGQSSR  180
QIDEKLSAEN SASSTSTDHH HQVITSLGLS NSHQITTLTA STMTPFSSLI SPNNTTAVDD  240
LHRLVNFQNQ LQNHQHFQNI SNQHINPAAL ATHQFTQLLQ PQVLPQPNLL LQGSLQSALI  300
SDGLWDWNSV QPDASCKDYQ PNNSSFK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-284315717130Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009764955.12e-83PREDICTED: transcription factor JUNGBRUNNEN 1-like
TrEMBLA0A1U7VSP65e-82A0A1U7VSP6_NICSY; transcription factor JUNGBRUNNEN 1-like
STRINGXP_009764955.18e-83(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA38882446
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.13e-51NAC domain containing protein 35