PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00155g00044.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 479aa    MW: 52095.1 Da    PI: 5.7928
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00155g00044.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.68e-31245303259
                               --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                               +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
  Peaxi162Scf00155g00044.1 245 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 303
                               699************************998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081132.787239305IPR003657WRKY domain
Gene3DG3DSA:2.20.25.808.7E-31241305IPR003657WRKY domain
SuperFamilySSF1182903.92E-26243305IPR003657WRKY domain
SMARTSM007741.4E-37244304IPR003657WRKY domain
PfamPF031061.0E-25246303IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 479 aa     Download sequence    Send to blast
MENNYQGDLA DIFRGSSTTT GAISGGNNNN TATTCGESSS VAGAITTDGW QFPSHPINYS  60
SSGIEEPSIQ DFGDPFCNLK DPLFHDLDMM ESTSSLFSSN EESNNNNNNN DGNTFFGPKI  120
LGEEIKRRSN TGNIFSRMLQ ISPTAKLAMS PCNSPMAAAC SSPNVTLNHP ASSVVAAGGA  180
VLLANETFIS PNSSKTCLVE QNSGLQISSP RNTGIKRRKS QAKKVVCIPA PAPVNSRQGG  240
EVVPSDLWAW RKYGQKPIKG SPYPRGYYRC SSSKGCSARK QVERSRTDPN MLVITYTSEH  300
NHPWPTQRNA LAGSTRSQPN SKSTSTPKSN ITSSSQSQKY SPTNSSFKED DQKDSNIIDN  360
NTSVTQGNIP TCPKVKEEVT ELEDHIDHHQ LVEMHDVEFS QGIQDTYQPT LPDSSLNHSH  420
EDFFADLVEL EADPLNLLFA KTLSGDIDQG QQNKAIGSFN LYDWSGNNTK DSSTSNNKQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B2e-25219306280Disease resistance protein RRS1
5w3x_D2e-25219306280Disease resistance protein RRS1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754415e-52HG975441.1 Solanum pennellii chromosome ch02, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016470815.10.0PREDICTED: probable WRKY transcription factor 14
TrEMBLA0A1S4A2I60.0A0A1S4A2I6_TOBAC; probable WRKY transcription factor 14
STRINGXP_009622546.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA67012433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.11e-81WRKY DNA-binding protein 35