PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00156g00213.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 251aa    MW: 28690.4 Da    PI: 8.4829
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00156g00213.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.14.8e-1178130155
                               CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               +++ h  +Er RR+++ +   +Lr++lP  +   ++K s ++  ++Av+YI++Lq
  Peaxi162Scf00156g00213.1  78 KKVVHRNVERHRRQEMANLHTKLRSILPLEF--IKGKRSASDHMQEAVNYIRHLQ 130
                               6788*************************65..*********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.07E-875134No hitNo description
SuperFamilySSF474591.31E-1175143IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.63377129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.9E-878130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.6E-1078146IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MDNYLWEIFS TSKQIIEDHV DQQLQIPFQI NGFCQQDQIH HQDLKGGPHE TSSVNRNNTK  60
KELRRRARST SDDSNKMKKV VHRNVERHRR QEMANLHTKL RSILPLEFIK GKRSASDHMQ  120
EAVNYIRHLQ KNIEGLDNTR EKIKNSSNFG AENGSTTSAS YVHKYAVTVN PCQDGMEILI  180
VNSCKEEMVP LSKVLGELLQ EGLNVVSCVY SKQDEWTLIR IQCQVSDISS VSADGLQKKL  240
SDAVNKTSIK E
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16268LRRRARS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019245688.11e-114PREDICTED: transcription factor bHLH120-like
TrEMBLA0A1J6IG601e-112A0A1J6IG60_NICAT; Transcription factor bhlh120
STRINGXP_009757518.11e-107(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA59824109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.12e-30bHLH family protein