PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00166g01027.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 470aa    MW: 52797.3 Da    PI: 7.739
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00166g01027.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.21.2e-31233289259
                               --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                                DgynWrKYGqK+vk se+prsYYrCt+++Cpvkkkver+  d++++eitY+g+Hnhe
  Peaxi162Scf00166g01027.1 233 YDGYNWRKYGQKKVKASECPRSYYRCTHPKCPVKKKVERAV-DGHITEITYSGQHNHE 289
                               59***************************************.***************7 PP
2WRKY107.75.5e-34401459159
                               ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                               ldDgy+WrKYGqK+vkg+++prsYYrCt++gC+v+k+ver++ dpk+v++tYeg+Hnh+
  Peaxi162Scf00166g01027.1 401 LDDGYKWRKYGQKVVKGNQHPRSYYRCTFPGCNVRKQVERASADPKAVITTYEGKHNHD 459
                               59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.6E-28228291IPR003657WRKY domain
SuperFamilySSF1182901.57E-24231291IPR003657WRKY domain
SMARTSM007742.6E-34232290IPR003657WRKY domain
PfamPF031066.0E-24234289IPR003657WRKY domain
PROSITE profilePS5081122.986234291IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.2E-36387461IPR003657WRKY domain
SuperFamilySSF1182906.93E-30393461IPR003657WRKY domain
PROSITE profilePS5081136.196396461IPR003657WRKY domain
SMARTSM007743.1E-40401460IPR003657WRKY domain
PfamPF031061.4E-26402459IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    Send to blast
MNETMRTSTI SAITIPPRPS YESFFNDMSS FSPGPMSLVS SFLQSPNYYD CSSYSQLLGG  60
AIASSPLAKP TILNEDEVCQ KNIGYKQNRP MSLVLAQSPL FMIPPGLSPS VKLKFSNYTG  120
IMWLFYGISI SMQSPFGMSH QQALAHVTAQ AALSQSYRQM QAEDRHSSQV SEEMLGHELS  180
TEQEVSSLQL KVETLDARLD NKPSDEQDMK FGLPEVSQSD NKPSYSVLDK PAYDGYNWRK  240
YGQKKVKASE CPRSYYRCTH PKCPVKKKVE RAVDGHITEI TYSGQHNHEL PQPSKQRKDG  300
PALDCTDSSD DKPDTRIHDW TVITSLDGSS PCRSDQVSTQ MESELLMTKE CDETKIRAID  360
EGYDEPNAKR MKTAVGTLAP SHGTVAESKI VLQTRSEVDL LDDGYKWRKY GQKVVKGNQH  420
PRSYYRCTFP GCNVRKQVER ASADPKAVIT TYEGKHNHDI PTVRNRNSQR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-36234461877Probable WRKY transcription factor 4
2lex_A1e-36234461877Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009768533.10.0PREDICTED: probable WRKY transcription factor 3
RefseqXP_016436720.10.0PREDICTED: probable WRKY transcription factor 3
TrEMBLA0A0P0UVE60.0A0A0P0UVE6_NICBE; Transcription factor
STRINGXP_009768533.10.0(Nicotiana sylvestris)
STRINGXP_009603130.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43142344
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.11e-112WRKY DNA-binding protein 4