PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00170g01230.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

FAR1

Protein Properties

Length: 189aa MW: 22315 Da PI: 5.1315

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00170g01230.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.7	5.1e-20	55	138	3	89
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 Yn+YA GF +rk +++++ rn+e t+ f Cs+eg++ +++ +++ r+r e r+gCka++k k ++ wev ++ eHnH Peaxi162Scf00170g01230.1 55 YNSYAVAKGFGIRKGAKTYN-RNTELTRCLFLCSCEGQSPLCSNN-QERIRQRLEYRCGCKARIKFKIL-NEIWEVFEFCDEHNH 136 **************9998.7777************9999.99999************99.9************ PP FAR1 88 el 89 ++ Peaxi162Scf00170g01230.1 137 PM 138 98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	7.8E-17	55	138	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 189 aa Download sequence Send to blast
MDTSVAANDN IDSEDHNIND QDCSELVHTM SNTNNGFDFK IGMKFSSEDE SYAAYNSYAV 60 AKGFGIRKGA KTYNRNTELT RCLFLCSCEG QSPLCSNNQE RIRQRLEYRC GCKARIKFKI 120 LNEIWEVFEF CDEHNHPMLL WRCKSESEFE LIWKQMMEEW DCGNNTWLQR LYNLREKWCP 180 AFSRFSQLD

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019266793.1	6e-67	PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1-like
TrEMBL	A0A1S3ZUA7	2e-65	A0A1S3ZUA7_TOBAC; Uncharacterized protein
STRING	XP_009628526.1	2e-64	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1726	9	31

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	2e-13	FAR1 family protein