PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00177g00512.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family MYB
Protein Properties Length: 311aa    MW: 34599.8 Da    PI: 8.4842
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00177g00512.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.42.8e-171461148
                              TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
           Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                              +g+WT+ Ed++l+d++k +G g W+  +++ g++R++k+c++rw++yl
  Peaxi162Scf00177g00512.1 14 KGAWTPMEDKILIDYIKVHGEGKWRNLPKKAGLKRCGKSCRLRWLNYL 61
                              79********************************************97 PP
2Myb_DNA-binding49.87.7e-1667110146
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
           Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                               rg+ T +E++l+++++k+lG++ W++Ia +++ gRt++++k++w++
  Peaxi162Scf00177g00512.1  67 RGNITRDEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNT 110
                               7899******************.*********.***********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.607.6E-24564IPR009057Homeodomain-like
PROSITE profilePS5129417.212961IPR017930Myb domain
SuperFamilySSF466891.99E-2812108IPR009057Homeodomain-like
SMARTSM007176.1E-141363IPR001005SANT/Myb domain
PfamPF002494.0E-151461IPR001005SANT/Myb domain
CDDcd001673.17E-111661No hitNo description
PROSITE profilePS5129424.55362116IPR017930Myb domain
Gene3DG3DSA:1.10.10.609.5E-2465116IPR009057Homeodomain-like
SMARTSM007176.2E-1566114IPR001005SANT/Myb domain
PfamPF002494.7E-1467110IPR001005SANT/Myb domain
CDDcd001672.02E-1171112No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MGRRPCCSKE GLNKGAWTPM EDKILIDYIK VHGEGKWRNL PKKAGLKRCG KSCRLRWLNY  60
LRPDIKRGNI TRDEEDLIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NIGKKLQHQR  120
AAANSGHAKS RPPVTTQDIV GSGSSLSSSA SPCLVVRTKA MRCTKVFIPT PKNTSHDNSI  180
TTNCNNDDDD KVMAVETTAL VASSSSSFTL SSILSEQQPI SGSSPVSLSG DQFMENSFNF  240
MFNFDMDDPF LSELLNAAEN TTTIGGDQVG DSFNRNEKER SYFPPSSSQS ALFSEETQHN  300
DLELWINGFS S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h8a_C4e-261211625128MYB TRANSFORMING PROTEIN
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019230335.11e-131PREDICTED: myb-related protein 330-like isoform X1
TrEMBLA0A314KL891e-130A0A314KL89_NICAT; Anthocyanin regulatory c1 protein
STRINGXP_009602508.11e-129(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22640.12e-63myb domain protein 3