PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00189g10021.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family TCP
Protein Properties Length: 313aa    MW: 35529.2 Da    PI: 7.1211
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00189g10021.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP115.19e-3621148289
                       TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..................... 65 
                               +gkkdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak ai++l ++                     
  Peaxi162Scf00189g10021.1  21 TGKKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKNAIDKLDELppwnpvndmnnmpttiaeada 105
                               79**************************************************************999999888888866655544 PP

                       TCP  66 ..........ssssaseceaesssssasnsssg.......................k 89 
                                         +         ++++++      +                       +
  Peaxi162Scf00189g10021.1 106 gssgtnivleQ---------QQQQQEF-----QlqrqleennqsggnsspymmqmpN 148
                               33322222221.........1111111.....1111111122222233334444440 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036349.3E-3421134IPR005333Transcription factor, TCP
PROSITE profilePS5136933.252381IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MKRATGGEIV QVEGGHIIRS TGKKDRHSKV CTAKGPRDRR VRLSAHTAIQ FYDVQDRLGY  60
DRPSKAVDWL IKKAKNAIDK LDELPPWNPV NDMNNMPTTI AEADAGSSGT NIVLEQQQQQ  120
QEFQLQRQLE ENNQSGGNSS PYMMQMPNGE TQSLGDTMKS FFPMNSGTSL MNFQNYPHEI  180
MPRASIHNED LGLSLHTTFH DHNNSNHRGN NSHNDQAALF SSQNFEANYP RMASWILPHQ  240
QTLFSQGATF PQREPLQSNF SHLIHHAWEA ERSMNVHQTD ISNRHFTTEF QIPARIHGEH  300
HQQPSSASPN SHH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zkt_A8e-222881154Putative transcription factor PCF6
5zkt_B8e-222881154Putative transcription factor PCF6
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019267112.11e-165PREDICTED: transcription factor TCP4-like
TrEMBLA0A4D6FC190.0A0A4D6FC19_PETHY; TCP9
STRINGXP_009629629.11e-153(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA66072234
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.32e-54TCP family protein