PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00192g00613.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

Trihelix

Protein Properties

Length: 981aa MW: 110368 Da PI: 7.217

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00192g00613.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	28.5	4e-09	208	267	14	73
trihelix 14 rremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrts 73 ++ +++ +rgk ++ + +ev++++ ++g++r +k+ kw+n+ ++++k+ e+e++ Peaxi162Scf00192g00613.1 208 TTTSGQQHGRGKTRADKDREVAEFLNRHGVNRDAKTAGTKWDNMLGEFRKVYEWERGADR 267 5566778889999******************************************98633 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF56112	5.35E-16	781	963	IPR011009	Protein kinase-like domain
Gene3D	G3DSA:1.10.510.10	5.9E-7	822	926	No hit	No description
CDD	cd00180	3.97E-15	829	964	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 981 aa Download sequence Send to blast
MDENKGETTK KQQQTQQHLS NSPDDNPDQD SPDNIPQQQQ QPQQVVVSGS FYIPTTSVSF 60 EQQQLQQQQQ FEAVNPKRPR YTASQWKFLP SSSSQQQQLK PSTAQVNILS TESSPISQTQ 120 AHPHMSTAAS SSDTTSSPSH SPRPTASGQE TSKPEGGGGG GGEQVHQQFR KGKYVSPVWK 180 PNEMLWLARA WKTQYQGEGD MRGEVSITTT SGQQHGRGKT RADKDREVAE FLNRHGVNRD 240 AKTAGTKWDN MLGEFRKVYE WERGADREQF GKSYFRLSPY ERKKHRLPAS FDEEVFEELS 300 QFMGPRMRTP QTRGGIGSQS DDIRTALTIT KSLPPPPPFR EDELTLSART KQFVMPSGTE 360 ALLHGTRGGF LGFETTSILD IGGPSSSSSK ELRRIGKIRM IWEESVSLWA EEGEHHRGRV 420 KLQGSSFLNA DEIAFLDDSM VACTMEAFED GPMKGFSVDR FLSGVQLKVF GRRKSSSATV 480 PSGPNERLQL PSSEFPIRST TIPWEFQDPT EYYVGCLRSP PPTLPSLFEL SWHLQQPPPE 540 ELRFPLRRDV FKDLPQGKEL FFTTSNELLD CRGITYEVLS SIMRSNPSLS SSTATDRDSY 600 IGLWDDCINR IISKFCSIEM VFVRKSSLSS LAENVQDQWP HVTAFLRNFC LWRGEETDQL 660 REGQLDPSSS IVEKLLWTYM DLPYVLGYYA VGYIVTFCAL SRSQDRIIRT DLYTVDLSTP 720 VERLKALVPC WRIAGLLPLL ADRCFHYMSS NGSSFKNLPY SDFERIDLGN GNFIEMTPNT 780 VVKYFSSKRK FVAVKEIYDF LDRRIPHAEF IVKASDKDMA LVFKPRGCKF KPVNCDQLIE 840 ALMQVTKALV ALHDLSFMHR DLGWDKVMRR SDRENEWLIT GFDEAVTAPQ INPHGGGAAA 900 ASGRHAPEMG RSLHTVKVDV WGVGQLVKSC GLVGVPKLLR ELQNRCLDHN PEQRPTAADC 960 YHHLLQLQST MSAAAAGGGG Y

Sequence ? help Back to Top

Protein Sequence Length: 981 aa Download sequence Send to blast

MDENKGETTK KQQQTQQHLS NSPDDNPDQD SPDNIPQQQQ QPQQVVVSGS FYIPTTSVSF  60
EQQQLQQQQQ FEAVNPKRPR YTASQWKFLP SSSSQQQQLK PSTAQVNILS TESSPISQTQ  120
AHPHMSTAAS SSDTTSSPSH SPRPTASGQE TSKPEGGGGG GGEQVHQQFR KGKYVSPVWK  180
PNEMLWLARA WKTQYQGEGD MRGEVSITTT SGQQHGRGKT RADKDREVAE FLNRHGVNRD  240
AKTAGTKWDN MLGEFRKVYE WERGADREQF GKSYFRLSPY ERKKHRLPAS FDEEVFEELS  300
QFMGPRMRTP QTRGGIGSQS DDIRTALTIT KSLPPPPPFR EDELTLSART KQFVMPSGTE  360
ALLHGTRGGF LGFETTSILD IGGPSSSSSK ELRRIGKIRM IWEESVSLWA EEGEHHRGRV  420
KLQGSSFLNA DEIAFLDDSM VACTMEAFED GPMKGFSVDR FLSGVQLKVF GRRKSSSATV  480
PSGPNERLQL PSSEFPIRST TIPWEFQDPT EYYVGCLRSP PPTLPSLFEL SWHLQQPPPE  540
ELRFPLRRDV FKDLPQGKEL FFTTSNELLD CRGITYEVLS SIMRSNPSLS SSTATDRDSY  600
IGLWDDCINR IISKFCSIEM VFVRKSSLSS LAENVQDQWP HVTAFLRNFC LWRGEETDQL  660
REGQLDPSSS IVEKLLWTYM DLPYVLGYYA VGYIVTFCAL SRSQDRIIRT DLYTVDLSTP  720
VERLKALVPC WRIAGLLPLL ADRCFHYMSS NGSSFKNLPY SDFERIDLGN GNFIEMTPNT  780
VVKYFSSKRK FVAVKEIYDF LDRRIPHAEF IVKASDKDMA LVFKPRGCKF KPVNCDQLIE  840
ALMQVTKALV ALHDLSFMHR DLGWDKVMRR SDRENEWLIT GFDEAVTAPQ INPHGGGAAA  900
ASGRHAPEMG RSLHTVKVDV WGVGQLVKSC GLVGVPKLLR ELQNRCLDHN PEQRPTAADC  960
YHHLLQLQST MSAAAAGGGG Y

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016557134.1	0.0	PREDICTED: uncharacterized protein LOC107856675
TrEMBL	A0A2G3CVZ1	0.0	A0A2G3CVZ1_CAPCH; Uncharacterized protein
STRING	XP_009775235.1	0.0	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA12936	14	16

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	1e-09	Trihelix family protein