PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00194g00110.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family FAR1
Protein Properties Length: 242aa    MW: 27609.7 Da    PI: 9.6377
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00194g00110.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR127.88.3e-09681114590
                      FAR1  45 kkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                               ++  e+++r+r e r+gC a++k k + +g wev ++   HnH++ 
  Peaxi162Scf00194g00110.1  68 SN-YEERQRQRLEYRCGCMARIKFKIS-NGIWEVFEFCDGHNHPMI 111
                               33.478999****************99.***************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031017.4E-670111IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MDVHSFNQET SQLTAKDQLN TEDHNIQNDF AFKIGMKFSS EDESYEAYNS YAVAKGFGVR  60
KGQSPLSSNY EERQRQRLEY RCGCMARIKF KISNGIWEVF EFCDGHNHPM IEENLRHFIP  120
SGRKLTSTNK SYPKVTTSIG SSRINDQVLD PIKKKGKGNG YGRLKPNIEQ KKKRAPRKTL  180
KARATQQQEQ QSSMINFELY GDSNTSFTQL LSQASANQFG GCIENQNSHI RGRNIDFSGQ  240
DN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1152173KKKGKGNGYGRLKPNIEQKKKR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019266793.11e-50PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1-like
STRINGXP_009628526.13e-48(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.15e-07FAR1-related sequence 11