PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00194g01039.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family NAC
Protein Properties Length: 389aa    MW: 43714.2 Da    PI: 9.9056
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00194g01039.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM97.81.6e-306914453128
                       NAM  53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                +ekewyf+++rd+ky++g+r+nr+t+sgyWkatg d+ + s++ + +glkktLvfy+g+apkg +t+W+m+eyrl
  Peaxi162Scf00194g01039.1  69 IGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRSENMRSIGLKKTLVFYTGKAPKGIRTSWIMNEYRL 144
                               4789**********************************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100534.3061165IPR003441NAC domain
SuperFamilySSF1019411.96E-3467165IPR003441NAC domain
PfamPF023652.9E-1368144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    Send to blast
RLGVYKDHLV QDWVGRVKQT GEKRNIDTHT HIYIPCRKHS FELILKRGFL EVQYITWFSL  60
LVCKALAAIG EKEWYFYVPR DRKYRNGDRP NRVTTSGYWK ATGADRMIRS ENMRSIGLKK  120
TLVFYTGKAP KGIRTSWIMN EYRLPQHETE RLQKAEISLC RVYKRPGIED HPSLPRSLPT  180
TRASSSSSSR GATSIKKQQH HQTQAVLQAD SLISPYNVGQ SSQQIDEKLS ETTSASSITS  240
TDHHHHHQHV ITSLGLNSLQ NSYNNIVLDP MVAVTSSSSS LAPFTSLVSP SSAGVGVDDL  300
HKLINFTGQS ISNNEFSLTT SYGGSSNHNY PINHPAVAAP FLQPQLVPTL QPQTNLLLQA  360
GSLQLSAYSD RLWEWNSINN QTDGNNPFK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A4e-352716527165NO APICAL MERISTEM PROTEIN
1ut4_B4e-352716527165NO APICAL MERISTEM PROTEIN
1ut7_A4e-352716527165NO APICAL MERISTEM PROTEIN
1ut7_B4e-352716527165NO APICAL MERISTEM PROTEIN
4dul_A4e-352716527165NAC domain-containing protein 19
4dul_B4e-352716527165NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00257DAPTransfer from AT2G02450Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754404e-92HG975440.1 Solanum pennellii chromosome ch01, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016491977.11e-133PREDICTED: NAC transcription factor 25-like isoform X2
TrEMBLA0A1S4BSW21e-132A0A1S4BSW2_TOBAC; NAC transcription factor 25-like isoform X2
STRINGXP_009626107.11e-132(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA38882446
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.14e-70NAC domain containing protein 35