PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00196g00118.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 256aa    MW: 28741.8 Da    PI: 8.1561
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00196g00118.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.81.9e-1354100354
                               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                               ++h+e+ErrRR+riN  +++Lr+llP+       K +Ka+ L +Av+++++L
  Peaxi162Scf00196g00118.1  54 KSHSEAERRRRKRINGHLATLRTLLPNT-----IKTDKASLLAEAVRCVREL 100
                               69*************************8.....6**************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.36451100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.61E-1154102No hitNo description
PfamPF000109.3E-1154100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-1354103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.96E-1355110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-1157106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048730.00275154202No hitNo description
SuperFamilySSF550213.62E-5159232No hitNo description
Gene3DG3DSA:3.30.70.2609.8E-6159227No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
MHPFSSFYDL AGSCSESYNF LHGIINTSAE MYNVESSCVS PRAMAEAKAI AANKSHSEAE  60
RRRRKRINGH LATLRTLLPN TIKTDKASLL AEAVRCVREL KKTTSELGTL SEDENTDDFN  120
YMGHNDHTTM KKFMFPSESD ELKLSYCDND SGNTLIKASI CCEDRPEIMM ELRRALSTIQ  180
GKVVRAEMAT VGGRIKCILW VQMLVSSSEN GCRDEGLGQL RRALKVVMDK SNLLQPHQNM  240
GQDLLGNKRP RLYHCS
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754431e-44HG975443.1 Solanum pennellii chromosome ch04, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016469430.11e-150PREDICTED: transcription factor bHLH30-like
TrEMBLA0A1S3ZYB91e-149A0A1S3ZYB9_TOBAC; transcription factor bHLH30-like
STRINGXP_009605433.11e-149(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA72832231
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.11e-35bHLH family protein