PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00201g00004.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 456aa    MW: 50203.4 Da    PI: 7.4828
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00201g00004.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH50.24.6e-16233279455
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                hn+ ErrRRdriN+++  L++l+P+a      K +Ka++L ++++Y+k+Lq
  Peaxi162Scf00201g00004.1 233 VHNQSERRRRDRINQKMKALQRLVPNA-----SKTDKASMLDEVINYLKQLQ 279
                               6*************************9.....7******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.104.5E-18227290IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.752229278IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.53E-19232301IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-13233279IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.70E-16234283No hitNo description
SMARTSM003539.2E-17235284IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 456 aa     Download sequence    Send to blast
MSHCTVPTWN QRQEQVVEAQ EAANKYLHVH SQQNQINHFV PMPNCEAVAE LTWENGQLAM  60
HGLGGILSNS QTKPTLGRTA DTLESIVHQA THHGQNQFLM QDEANIGMFC GGKWGESSLQ  120
MAEEATVLAK KRMRSDTDPQ YGGKSVEVFS TTKNENYEYA ERSACASASA TFCRENDTTM  180
VSWPSFDESS RSVKSKTTCD DDSACHNGAS ENKEEKHETK GSNSSRRNRA AVVHNQSERR  240
RRDRINQKMK ALQRLVPNAS KTDKASMLDE VINYLKQLQA QIQMMSSTTA RNMAPQMMMP  300
LGMHQHIQMS LQLARMGMGV GLGMGMGMLD MTAFARAAAA TTPHQSLSTH PGLIHHPNPM  360
ATPTANPFMP TAFTMPAAPA IPSATQATVD RATTVNPVTS TTNNSVPLTD PYSSFLPRSM  420
DMEFFNNMAA LYSQQAKESA QTTGSKLNHG NLSQRE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1237242ERRRRD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009630766.10.0PREDICTED: transcription factor UNE10-like isoform X2
TrEMBLA0A1U8FWY30.0A0A1U8FWY3_CAPAN; transcription factor UNE10 isoform X1
STRINGXP_009630765.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA54371732
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00050.16e-41bHLH family protein