PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00207g01131.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

Dof

Protein Properties

Length: 169aa MW: 18862.8 Da PI: 8.9102

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00207g01131.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122	2.1e-38	17	76	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++++lkcprC+s ntkfCyynny+lsqPr+fCk+C+ryWtkGG+lr +PvGgg+rk+ k+ Peaxi162Scf00207g01131.1 17 EQEILKCPRCESLNTKFCYYNNYNLSQPRHFCKSCKRYWTKGGTLRKIPVGGGSRKHTKR 76 57899***************************************************9876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-27	11	76	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.7E-33	19	75	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.286	21	75	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	23	59	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 169 aa Download sequence Send to blast
MQEPSIYTQI NQPLIPEQEI LKCPRCESLN TKFCYYNNYN LSQPRHFCKS CKRYWTKGGT 60 LRKIPVGGGS RKHTKRSPNN NNKRYSTTST SAARPTVPAF DQSSPILDVN GPFSSLSTSN 120 GPEFGNLLGR ESSSSGLVSG QDDIPQSGNK YYTDEYLGVQ NDGDSSYWN

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006357370.1	1e-61	PREDICTED: dof zinc finger protein DOF3.1-like
TrEMBL	A0A0V0HDG7	2e-60	A0A0V0HDG7_SOLCH; Putative dof zinc finger protein DOF3.1-like
STRING	XP_009593393.1	1e-59	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	1e-38	DOF zinc finger protein 1