PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00209g00232.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 440aa    MW: 49964.5 Da    PI: 7.7577
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00209g00232.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.14.7e-30246305159
                               ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                               ++Dg++WrKYGqK  kg+++pr+YYrCt + +Cpv+k+v+r+ ed +++++tYeg+Hnh+
  Peaxi162Scf00209g00232.1 246 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVSpSCPVRKQVQRCFEDMSILTTTYEGTHNHP 305
                               58**************************999****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.4E-30238307IPR003657WRKY domain
PROSITE profilePS5081127.646241307IPR003657WRKY domain
SuperFamilySSF1182901.44E-26243307IPR003657WRKY domain
SMARTSM007749.4E-36246306IPR003657WRKY domain
PfamPF031062.1E-26247305IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    Send to blast
TNVVVKDMVV FPIRRLRQRE EVLNEKQTML RKDCAVDSTT MNDKEEKLLE PSKKATVTTT  60
MNTNSRDSFF TYKKNQEDQL NSTKHQIDEA KEENERLKFI LSKITRDYQS LQIHFQGIVQ  120
HEKLHKSKNI SRTIEEEDEV ELVSLSLGRN VGDIKQLRDQ KEYENECKDK KHSGKFDGLE  180
LGLECRSFSP DHFSEDMKIY SPENSFEESK KEDTIEPCII QNPSSKMVWG DDEDFQQQNP  240
LKKARMNDGC QWRKYGQKIA KGNPCPRAYY RCTVSPSCPV RKQVQRCFED MSILTTTYEG  300
THNHPLPVSA TAMASTTSAA ASMLRCTSSS STSQHNDNYS YFSFNTSNNT TTNNLATRPP  360
TFHLPKTSIS TSQSHPTITL DFTNHVPSSS SSSNTHRLFS SSSLFSSHRY NSSTSLNFSS  420
SAPTSSSNSY TSLVAAFSIL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-202463071474WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018625866.11e-141PREDICTED: probable WRKY transcription factor 72 isoform X2
TrEMBLA0A1J6HSS81e-137A0A1J6HSS8_NICAT; Putative wrky transcription factor 61
TrEMBLA0A1S4C7U51e-137A0A1S4C7U5_TOBAC; probable WRKY transcription factor 72 isoform X1
STRINGXP_009599235.11e-138(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19452464
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18860.12e-41WRKY DNA-binding protein 61