PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00209g00932.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 184aa    MW: 20017.5 Da    PI: 5.7926
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00209g00932.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.52.1e-07761151255
                               HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  Peaxi162Scf00209g00932.1  76 RREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 115
                               9*****************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.25864114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.0E-772120IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.01E-1376130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.27E-776119No hitNo description
PfamPF000101.2E-476115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.0E-1477130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MDPQATLMNN SGTFQSPPFN LAEIWNFPIN AAAAGGGSAT PYIFPSTAPD NRTRKRRGDD  60
DESVKGVSTS GNALARREKI SERMKILQDL VPGCNKVIGK ALVLDEIINY IQSLQHQVEF  120
LSMKLEAVNS STPSMEGFPA KDVGQQMFDT NAMAFASQAS REYAKGASPD WLHMQLGGGF  180
ERTT
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009776013.14e-70PREDICTED: transcription factor bHLH79 isoform X2
RefseqXP_016481157.14e-70PREDICTED: transcription factor bHLH79-like isoform X2
SwissprotQ69WS33e-49BH094_ORYSJ; Transcription factor BHLH094
TrEMBLA0A1S4AX038e-69A0A1S4AX03_TOBAC; transcription factor bHLH79-like isoform X2
TrEMBLA0A1U7WBK28e-69A0A1U7WBK2_NICSY; transcription factor bHLH79 isoform X2
STRINGSolyc05g006650.2.18e-67(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12872471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.11e-57BIG PETAL P